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CGB_N3350C 1,3-beta-glucanosyltransferase, putative [ Cryptococcus gattii WM276 ]

Gene ID: 10186709, updated on 6-Jun-2024

Summary

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Gene symbol
CGB_N3350C
Gene description
1,3-beta-glucanosyltransferase, putative
Locus tag
CGB_N3350C
See related
FungiDB:CGB_N3350C; VEuPathDB:CGB_N3350C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cryptococcus gattii WM276 (strain: WM276, serotype: B)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex
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Genomic context

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See CGB_N3350C in Genome Data Viewer
Location:
chromosome: N
Exon count:
11
Sequence:
Chromosome: N; NC_014951.1 (614401..616646, complement)

Chromosome N - NC_014951.1Genomic Context describing neighboring genes Neighboring gene Phospholipid metabolism-related protein, putative Neighboring gene Arginine metabolism transcriptional control protein, putative Neighboring gene Mitochondrial ornithine transporter 1, putative Neighboring gene Uracil permease

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014951.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome variation in Cryptococcus gattii, an emerging pathogen of immunocompetent hosts. D'Souza CA, et al. mBio, 2011. PMID 21304167, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-glucanosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fungal-type cell wall (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in fungal-type cell wall IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1,3-beta-glucanosyltransferase, putative
XP_003197628.1
  • Similar to TIGR gene model, INSD accession AAW47197.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014951.1 Reference assembly

    Range
    614401..616646 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003197580.1 → XP_003197628.1  1,3-beta-glucanosyltransferase, putative [Cryptococcus gattii WM276]

    See identical proteins and their annotated locations for XP_003197628.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E6RFN4
    Conserved Domains (2) summary
    pfam07983
    Location:385 → 468
    X8; X8 domain
    cl23725
    Location:17 → 338
    Glyco_hydro_1; Glycosyl hydrolase family 1
Nucleotide Protein
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