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PLD3 phospholipase D family member 3 [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 101866889, updated on 10-Oct-2024

Summary

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Gene symbol
PLD3
Gene description
phospholipase D family member 3
See related
Ensembl:ENSMFAG00000031315
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See PLD3 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 19 NC_088393.1 (47446652..47478291)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 19 NC_052273.1 (37962267..37993253)

Chromosome 19 - NC_088393.1Genomic Context describing neighboring genes Neighboring gene AKT serine/threonine kinase 2 Neighboring gene U6 spliceosomal RNA Neighboring gene chromosome 19 C19orf47 homolog Neighboring gene homeodomain interacting protein kinase 4 Neighboring gene periaxin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Substitution rate and structural divergence of 5'UTR evolution: comparative analysis between human and cynomolgus monkey cDNAs. Osada N, et al. Mol Biol Evol, 2005 Oct. PMID 15944441
  2. Rate of evolution in brain-expressed genes in humans and other primates. Wang HY, et al. PLoS Biol, 2007 Feb. PMID 17194215, Free PMC Article
  3. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
5'-3' exonuclease PLD3
Names
Choline phosphatase 3
PLD 3
Phosphatidylcholine-hydrolyzing phospholipase D3
Phospholipase D3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088393.1 Reference T2T-MFA8v1.0

    Range
    47446652..47478291
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065534370.1 → XP_065390442.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  2. XM_065534372.1 → XP_065390444.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  3. XM_065534371.1 → XP_065390443.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  4. XM_065534379.1 → XP_065390451.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  5. XM_065534383.1 → XP_065390455.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  6. XM_065534384.1 → XP_065390456.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  7. XM_065534377.1 → XP_065390449.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  8. XM_065534376.1 → XP_065390448.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  9. XM_065534378.1 → XP_065390450.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  10. XM_065534367.1 → XP_065390439.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  11. XM_065534386.1 → XP_065390458.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  12. XM_065534385.1 → XP_065390457.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  13. XM_065534381.1 → XP_065390453.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  14. XM_065534388.1 → XP_065390460.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  15. XM_065534389.1 → XP_065390461.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  16. XM_065534380.1 → XP_065390452.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  17. XM_065534368.1 → XP_065390440.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  18. XM_005589268.4 → XP_005589325.1  5'-3' exonuclease PLD3

    See identical proteins and their annotated locations for XP_005589325.1

    UniProtKB/Swiss-Prot
    Q4R583
    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5
    Conserved Domains (1) summary
    PHA02820
    Location:77 → 490
    PHA02820; phospholipase-D-like protein; Provisional

  19. XM_065534387.1 → XP_065390459.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  20. XM_065534375.1 → XP_065390447.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  21. XM_065534390.1 → XP_065390462.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  22. XM_065534391.1 → XP_065390463.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  23. XM_065534392.1 → XP_065390464.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  24. XM_065534382.1 → XP_065390454.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  25. XM_065534373.1 → XP_065390445.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  26. XM_065534394.1 → XP_065390466.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  27. XM_065534393.1 → XP_065390465.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  28. XM_045380226.2 → XP_045236161.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5
    Conserved Domains (1) summary
    PHA02820
    Location:77 → 490
    PHA02820; phospholipase-D-like protein; Provisional

  29. XM_065534396.1 → XP_065390468.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  30. XM_065534397.1 → XP_065390469.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  31. XM_005589265.4 → XP_005589322.1  5'-3' exonuclease PLD3

    See identical proteins and their annotated locations for XP_005589322.1

    UniProtKB/Swiss-Prot
    Q4R583
    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5
    Conserved Domains (1) summary
    PHA02820
    Location:77 → 490
    PHA02820; phospholipase-D-like protein; Provisional

  32. XM_065534374.1 → XP_065390446.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  33. XM_065534395.1 → XP_065390467.1  5'-3' exonuclease PLD3

    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5

  34. XM_005589270.4 → XP_005589327.1  5'-3' exonuclease PLD3

    See identical proteins and their annotated locations for XP_005589327.1

    UniProtKB/Swiss-Prot
    Q4R583
    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5
    Conserved Domains (1) summary
    PHA02820
    Location:77 → 490
    PHA02820; phospholipase-D-like protein; Provisional

  35. XM_005589264.3 → XP_005589321.1  5'-3' exonuclease PLD3

    See identical proteins and their annotated locations for XP_005589321.1

    UniProtKB/Swiss-Prot
    Q4R583
    UniProtKB/TrEMBL
    A0A2K5UUY9, A0A8J8XQT5, G7PXL5
    Conserved Domains (1) summary
    PHA02820
    Location:77 → 490
    PHA02820; phospholipase-D-like protein; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q4R583.1 GenPept UniProtKB/Swiss-Prot:Q4R583

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