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CNBP CCHC-type zinc finger nucleic acid binding protein [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 101866787, updated on 7-Jun-2024

Summary

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Gene symbol
CNBP
Gene description
CCHC-type zinc finger nucleic acid binding protein
See related
Ensembl:ENSMFAG00000030262
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See CNBP in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 2 NC_088376.1 (154247874..154263239)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 2 NC_052256.1 (48721073..48736340, complement)

Chromosome 2 - NC_088376.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123571788 Neighboring gene COPI coat complex subunit gamma 1 Neighboring gene uncharacterized LOC135969382 Neighboring gene ISY1 splicing factor homolog Neighboring gene RAB43, member RAS oncogene family

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Substitution rate and structural divergence of 5'UTR evolution: comparative analysis between human and cynomolgus monkey cDNAs. Osada N, et al. Mol Biol Evol, 2005 Oct. PMID 15944441
  2. Rate of evolution in brain-expressed genes in humans and other primates. Wang HY, et al. PLoS Biol, 2007 Feb. PMID 17194215, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of cytoplasmic translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cellular nucleic acid-binding protein; CCHC-type zinc finger nucleic acid binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088376.1 Reference T2T-MFA8v1.0

    Range
    154247874..154263239
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045385652.2 → XP_045241587.1  CCHC-type zinc finger nucleic acid binding protein isoform X2

    UniProtKB/TrEMBL
    Q4R501
    Conserved Domains (1) summary
    PTZ00368
    Location:54 → 171
    PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional

  2. XM_065539060.1 → XP_065395132.1  CCHC-type zinc finger nucleic acid binding protein isoform X1

  3. XM_005571739.4 → XP_005571796.1  CCHC-type zinc finger nucleic acid binding protein isoform X4

    See identical proteins and their annotated locations for XP_005571796.1

    UniProtKB/TrEMBL
    A0A2K5UPD8
    Related
    ENSMFAP00000014300.1
    Conserved Domains (1) summary
    PTZ00368
    Location:47 → 164
    PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional

  4. XM_065539061.1 → XP_065395133.1  CCHC-type zinc finger nucleic acid binding protein isoform X3

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001283313.1: Suppressed sequence

    Description
    NM_001283313.1: This RefSeq record was removed as a result of standard genome annotation processing. Contact info@ncbi.nlm.nih.gov for further information.
Nucleotide Protein
Heading Accession and Version

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