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CPT1B carnitine palmitoyltransferase 1B [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 101866032, updated on 10-Oct-2024

Summary

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Gene symbol
CPT1B
Gene description
carnitine palmitoyltransferase 1B
See related
Ensembl:ENSMFAG00000023471
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See CPT1B in Genome Data Viewer
Location:
chromosome: 10
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 10 NC_088384.1 (982395..993516)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 10 NC_052264.1 (60713067..60724680)

Chromosome 10 - NC_088384.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135965388 Neighboring gene choline kinase beta Neighboring gene synaptonemal complex central element protein 3 Neighboring gene kelch domain containing 7B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Substitution rate and structural divergence of 5'UTR evolution: comparative analysis between human and cynomolgus monkey cDNAs. Osada N, et al. Mol Biol Evol, 2005 Oct. PMID 15944441
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carnitine O-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty acid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carnitine O-palmitoyltransferase 1, muscle isoform
Names
carnitine palmitoyltransferase 1B (muscle)
XP_045219254.1
XP_045219255.1
XP_045219257.1
XP_045219258.1
XP_045219259.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088384.1 Reference T2T-MFA8v1.0

    Range
    982395..993516
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045363320.2 → XP_045219255.1  carnitine O-palmitoyltransferase 1, muscle isoform isoform X1

    Conserved Domains (2) summary
    pfam00755
    Location:174 → 762
    Carn_acyltransf; Choline/Carnitine o-acyltransferase
    pfam16484
    Location:1 → 47
    CPT_N; Carnitine O-palmitoyltransferase N-terminus

  2. XM_045363319.2 → XP_045219254.1  carnitine O-palmitoyltransferase 1, muscle isoform isoform X1

    Conserved Domains (2) summary
    pfam00755
    Location:174 → 762
    Carn_acyltransf; Choline/Carnitine o-acyltransferase
    pfam16484
    Location:1 → 47
    CPT_N; Carnitine O-palmitoyltransferase N-terminus

  3. XM_045363323.2 → XP_045219258.1  carnitine O-palmitoyltransferase 1, muscle isoform isoform X3

  4. XM_045363322.2 → XP_045219257.1  carnitine O-palmitoyltransferase 1, muscle isoform isoform X2

    UniProtKB/TrEMBL
    A0A2K5UJ22
    Conserved Domains (2) summary
    pfam00755
    Location:173 → 761
    Carn_acyltransf; Choline/Carnitine o-acyltransferase
    pfam16484
    Location:1 → 47
    CPT_N; Carnitine O-palmitoyltransferase N-terminus

  5. XM_045363324.2 → XP_045219259.1  carnitine O-palmitoyltransferase 1, muscle isoform isoform X4

RNA

  1. XR_006689972.2 RNA Sequence

  2. XR_006689971.2 RNA Sequence

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001283413.1: Suppressed sequence

    Description
    NM_001283413.1: This RefSeq record was removed as a result of standard genome annotation processing. Contact info@ncbi.nlm.nih.gov for further information.
Nucleotide Protein
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