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CGB_I4040W uncharacterized protein [ Cryptococcus gattii WM276 ]

Gene ID: 10186567, updated on 6-Jun-2024

Summary

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Gene symbol
CGB_I4040W
Gene description
uncharacterized protein
Locus tag
CGB_I4040W
See related
FungiDB:CGB_I4040W; VEuPathDB:CGB_I4040W
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cryptococcus gattii WM276 (strain: WM276, serotype: B)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex
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Genomic context

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See CGB_I4040W in Genome Data Viewer
Location:
chromosome: I
Exon count:
8
Sequence:
Chromosome: I; NC_014946.1 (803019..806049)

Chromosome I - NC_014946.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Rho1 GTPase Neighboring gene uncharacterized protein Neighboring gene glutamate synthase (NADH), putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014946.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome variation in Cryptococcus gattii, an emerging pathogen of immunocompetent hosts. D'Souza CA, et al. mBio, 2011. PMID 21304167, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing to lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_003196255.1
  • Similar to TIGR gene model, INSD accession AAW46052.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014946.1 Reference assembly

    Range
    803019..806049
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003196207.1 → XP_003196255.1  uncharacterized protein CGB_I4040W [Cryptococcus gattii WM276]

    See identical proteins and their annotated locations for XP_003196255.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    E6RCE9
    Conserved Domains (4) summary
    pfam11380
    Location:404 → 457
    Stealth_CR2; Stealth protein CR2, conserved region 2
    pfam17101
    Location:191 → 217
    Stealth_CR1; Stealth protein CR1, conserved region 1
    pfam17102
    Location:505 → 557
    Stealth_CR3; Stealth protein CR3, conserved region 3
    pfam17103
    Location:810 → 863
    Stealth_CR4; Stealth protein CR4, conserved region 4
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
E6RCE9.1

Gene LinkOut

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Molecular Biology Databases