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CGB_K0110C Drug transporter, putative [ Cryptococcus gattii WM276 ]

Gene ID: 10185056, updated on 6-Jun-2024

Summary

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Gene symbol
CGB_K0110C
Gene description
Drug transporter, putative
Locus tag
CGB_K0110C
See related
FungiDB:CGB_K0110C; VEuPathDB:CGB_K0110C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cryptococcus gattii WM276 (strain: WM276, serotype: B)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex
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Genomic context

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See CGB_K0110C in Genome Data Viewer
Location:
chromosome: K
Exon count:
10
Sequence:
Chromosome: K; NC_014948.1 (23465..25780, complement)

Chromosome K - NC_014948.1Genomic Context describing neighboring genes Neighboring gene MFS transporter, putative Neighboring gene Amidohydrolase, putative Neighboring gene Hypothetical Protein Neighboring gene TPR domain protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014948.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome variation in Cryptococcus gattii, an emerging pathogen of immunocompetent hosts. D'Souza CA, et al. mBio, 2011. PMID 21304167, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Drug transporter, putative
XP_003196589.1
  • Similar to TIGR gene model, INSD accession AAW45748.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014948.1 Reference assembly

    Range
    23465..25780 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003196541.1 → XP_003196589.1  Drug transporter, putative [Cryptococcus gattii WM276]

    See identical proteins and their annotated locations for XP_003196589.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E6RD25
    Conserved Domains (2) summary
    cd06174
    Location:79 → 467
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    COG0477
    Location:74 → 387
    ProP; MFS family permease [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only]
Nucleotide Protein
Heading Accession and Version

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