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Ubox5 U-box domain containing 5 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101844536, updated on 8-Mar-2024

Summary

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Gene symbol
Ubox5
Gene description
U-box domain containing 5
See related
EnsemblRapid:ENSMAUG00000019757
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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See Ubox5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429189.1 (97190477..97226440, complement)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801618.1 (10461564..10499874, complement)

NW_024429189.1Genomic Context describing neighboring genes Neighboring gene oxytocin-neurophysin 1-like Neighboring gene arginine vasopressin Neighboring gene FAST kinase domains 5 Neighboring gene leucine zipper tumor suppressor family member 3 Neighboring gene DDRGK domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing and development of an expression microarray platform for liver infection in adenovirus type 5-infected Syrian golden hamsters. Ying B, et al. Virology, 2015 Nov. PMID 26319212, Free PMC Article
  2. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-ubiquitin ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RING finger protein 37

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429189.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    97190477..97226440 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040746296.1 → XP_040602230.1  RING finger protein 37 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0CMT4
    Related
    ENSMAUP00000022276.2, ENSMAUT00000026274.2

  2. XM_040746298.1 → XP_040602232.1  RING finger protein 37 isoform X2

    UniProtKB/TrEMBL
    A0A3Q0CMV5
    Related
    ENSMAUP00000046022.1, ENSMAUT00000049925.1
    Conserved Domains (2) summary
    cd16537
    Location:427 → 473
    RING-HC_RNF37; RING finger, HC subclass, found in RING finger protein 37 (RNF37)
    cd16660
    Location:260 → 312
    RING-Ubox_RNF37; U-box domain, a modified RING finger, found in RING finger protein 37 (RNF37)

  3. XM_040746295.1 → XP_040602229.1  RING finger protein 37 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0CMT4
    Related
    ENSMAUP00000052684.1, ENSMAUT00000057504.1

  4. XM_040746297.1 → XP_040602231.1  RING finger protein 37 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0CMT4
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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