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Znf146 zinc finger protein 146 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101843705, updated on 8-Mar-2024

Summary

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Gene symbol
Znf146
Gene description
zinc finger protein 146
See related
EnsemblRapid:ENSMAUG00000014522
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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See Znf146 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429223.1 (1263478..1277062, complement)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801721.1 (6109439..6123009)

NW_024429223.1Genomic Context describing neighboring genes Neighboring gene pregnancy-specific glycoprotein 22-like Neighboring gene zinc finger protein 382 Neighboring gene cytochrome c oxidase subunit 7A1, mitochondrial Neighboring gene uncharacterized LOC121135982 Neighboring gene calpain small subunit 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein OZF

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429223.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    1263478..1277062 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013121809.3 → XP_012977263.1  zinc finger protein OZF

    See identical proteins and their annotated locations for XP_012977263.1

    UniProtKB/TrEMBL
    A0A1U8CNE8
    Related
    ENSMAUP00000038160.1, ENSMAUT00000045947.1
    Conserved Domains (3) summary
    COG5048
    Location:1 → 260
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:214 → 234
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:255 → 279
    zf-H2C2_2; Zinc-finger double domain

  2. XM_013121808.3 → XP_012977262.1  zinc finger protein OZF

    See identical proteins and their annotated locations for XP_012977262.1

    UniProtKB/TrEMBL
    A0A1U8CNE8
    Related
    ENSMAUP00000056324.1, ENSMAUT00000066768.1
    Conserved Domains (3) summary
    COG5048
    Location:1 → 260
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:214 → 234
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:255 → 279
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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