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P3h2 prolyl 3-hydroxylase 2 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101843136, updated on 8-Mar-2024

Summary

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Gene symbol
P3h2
Gene description
prolyl 3-hydroxylase 2
See related
EnsemblRapid:ENSMAUG00000004803
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Also known as
Leprel1
Orthologs
human mouse all
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Genomic context

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See P3h2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429192.1 (64368741..64517517)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801632.1 (14006862..14154887)

NW_024429192.1Genomic Context describing neighboring genes Neighboring gene anaphase-promoting complex subunit 10-like Neighboring gene uncharacterized LOC121141979 Neighboring gene uncharacterized LOC121141980 Neighboring gene tumor protein p63

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-proline 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prolyl 3-hydroxylase 2
Names
leprecan-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429192.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    64368741..64517517
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005071594.4 → XP_005071651.1  prolyl 3-hydroxylase 2

    UniProtKB/TrEMBL
    A0A1U7QDK4
    Related
    ENSMAUP00000004037.1, ENSMAUT00000005988.2
    Conserved Domains (1) summary
    smart00702
    Location:468 → 666
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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