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Khnyn KH and NYN domain containing [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101842304, updated on 8-Mar-2024

Summary

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Gene symbol
Khnyn
Gene description
KH and NYN domain containing
See related
EnsemblRapid:ENSMAUG00000035704
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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See Khnyn in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429269.1 (12838509..12850643, complement)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801798.1 (2533494..2542867)

NW_024429269.1Genomic Context describing neighboring genes Neighboring gene mast cell protease 1 Neighboring gene chymase Neighboring gene short chain dehydrogenase/reductase family 39U member 1 Neighboring gene cerebellin 3 precursor Neighboring gene NYN domain and retroviral integrase containing Neighboring gene uncharacterized LOC121137835

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing and development of an expression microarray platform for liver infection in adenovirus type 5-infected Syrian golden hamsters. Ying B, et al. Virology, 2015 Nov. PMID 26319212, Free PMC Article
  2. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic ribonucleoprotein granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein KHNYN

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429269.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    12838509..12850643 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021236232.2 → XP_021091891.2  protein KHNYN

    UniProtKB/TrEMBL
    A0A1U7RER2
    Related
    ENSMAUP00000058084.1, ENSMAUT00000072558.1
    Conserved Domains (1) summary
    cl28905
    Location:511 → 637
    PIN_SF; PIN (PilT N terminus) domain: Superfamily
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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