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Cep170 centrosomal protein 170 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101840743, updated on 8-Mar-2024

Summary

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Gene symbol
Cep170
Gene description
centrosomal protein 170
See related
EnsemblRapid:ENSMAUG00000038542
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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See Cep170 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429266.1 (16562580..16647035)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801684.1 (5886722..5971781)

NW_024429266.1Genomic Context describing neighboring genes Neighboring gene AKT serine/threonine kinase 3 Neighboring gene SHH signaling and ciliogenesis regulator SDCCAG8 Neighboring gene 60S ribosomal protein L30-like Neighboring gene uncharacterized LOC110342455 Neighboring gene phospholipase D family member 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centriole IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centrosomal protein of 170 kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429266.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    16562580..16647035
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013119188.3 → XP_012974642.1  centrosomal protein of 170 kDa isoform X4

    UniProtKB/TrEMBL
    A0A1U8C5A5
    Related
    ENSMAUP00000050575.1, ENSMAUT00000039537.1
    Conserved Domains (3) summary
    COG1716
    Location:12 → 133
    FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
    cd00060
    Location:5 → 98
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    pfam15308
    Location:804 → 1471
    CEP170_C; CEP170 C-terminus

  2. XM_013119186.3 → XP_012974640.1  centrosomal protein of 170 kDa isoform X1

    UniProtKB/TrEMBL
    A0A1U8C893
    Related
    ENSMAUP00000038821.1, ENSMAUT00000062286.1
    Conserved Domains (3) summary
    COG1716
    Location:12 → 133
    FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
    cd00060
    Location:5 → 98
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    pfam15308
    Location:804 → 1507
    CEP170_C; CEP170 C-terminus

  3. XM_013119187.3 → XP_012974641.1  centrosomal protein of 170 kDa isoform X3

    UniProtKB/TrEMBL
    A0A1U8C5A8
    Conserved Domains (3) summary
    COG1716
    Location:12 → 133
    FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
    cd00060
    Location:5 → 98
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    pfam15308
    Location:804 → 1480
    CEP170_C; CEP170 C-terminus

  4. XM_013119191.3 → XP_012974645.1  centrosomal protein of 170 kDa isoform X7

    UniProtKB/TrEMBL
    A0A1U8C8A0
    Conserved Domains (3) summary
    COG1716
    Location:12 → 133
    FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
    cd00060
    Location:5 → 98
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    pfam15308
    Location:706 → 1373
    CEP170_C; CEP170 C-terminus

  5. XM_013119189.3 → XP_012974643.1  centrosomal protein of 170 kDa isoform X5

    UniProtKB/TrEMBL
    A0A1U8CFN5
    Conserved Domains (3) summary
    COG1716
    Location:12 → 133
    FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
    cd00060
    Location:5 → 98
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    pfam15308
    Location:706 → 1409
    CEP170_C; CEP170 C-terminus

  6. XM_005078164.4 → XP_005078221.1  centrosomal protein of 170 kDa isoform X2

    UniProtKB/TrEMBL
    A0A1U7QPI7
    Related
    ENSMAUP00000047653.1, ENSMAUT00000039231.1
    Conserved Domains (3) summary
    COG1716
    Location:12 → 133
    FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
    cd00060
    Location:5 → 98
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    pfam15308
    Location:804 → 1497
    CEP170_C; CEP170 C-terminus

  7. XM_013119190.3 → XP_012974644.1  centrosomal protein of 170 kDa isoform X6

    UniProtKB/TrEMBL
    A0A1U8CG91
    Conserved Domains (3) summary
    COG1716
    Location:12 → 133
    FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
    cd00060
    Location:5 → 98
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    pfam15308
    Location:706 → 1399
    CEP170_C; CEP170 C-terminus
Nucleotide Protein
Heading Accession and Version

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