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Lsm14b LSM family member 14B [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101840012, updated on 8-Mar-2024

Summary

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Gene symbol
Lsm14b
Gene description
LSM family member 14B
See related
EnsemblRapid:ENSMAUG00000020700
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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See Lsm14b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429209.1 (23451342..23461249)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801651.1 (11104591..11126209)

NW_024429209.1Genomic Context describing neighboring genes Neighboring gene TATA-box binding protein associated factor 4 Neighboring gene uncharacterized LOC121134553 Neighboring gene proteasome 20S subunit alpha 7 Neighboring gene SS18L1 subunit of BAF chromatin remodeling complex

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein LSM14 homolog B
Names
LSM14B, SCD6 homolog B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429209.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    23451342..23461249
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021229769.2 → XP_021085428.2  protein LSM14 homolog B isoform X2

    UniProtKB/TrEMBL
    A0A3Q0CXL3
    Related
    ENSMAUP00000058305.1, ENSMAUT00000071961.1
    Conserved Domains (2) summary
    cd01736
    Location:6 → 79
    LSm14_N; Like-Sm protein 14, N-terminal domain
    pfam09532
    Location:287 → 388
    FDF; FDF domain

  2. XM_021229770.2 → XP_021085429.2  protein LSM14 homolog B isoform X3

    UniProtKB/TrEMBL
    A0A3Q0CYT3
    Conserved Domains (2) summary
    cd01736
    Location:6 → 79
    LSm14_N; Like-Sm protein 14, N-terminal domain
    pfam09532
    Location:261 → 362
    FDF; FDF domain

  3. XM_021229768.2 → XP_021085427.2  protein LSM14 homolog B isoform X1

    UniProtKB/TrEMBL
    A0A3Q0CXG4
    Conserved Domains (2) summary
    cd01736
    Location:6 → 79
    LSm14_N; Like-Sm protein 14, N-terminal domain
    pfam09532
    Location:287 → 388
    FDF; FDF domain

  4. XM_021229771.2 → XP_021085430.2  protein LSM14 homolog B isoform X4

    UniProtKB/TrEMBL
    A0A3Q0CSM0
Nucleotide Protein
Heading Accession and Version

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