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Myom2 myomesin 2 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101836065, updated on 8-Mar-2024

Summary

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Gene symbol
Myom2
Gene description
myomesin 2
See related
EnsemblRapid:ENSMAUG00000006729
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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See Myom2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
41
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429212.1 (4443016..4557420, complement)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801736.1 (3771408..3848493, complement)

NW_024429212.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110343254 Neighboring gene uncharacterized LOC121135161 Neighboring gene U6 spliceosomal RNA Neighboring gene kelch repeat and BTB domain containing 11 Neighboring gene Rho guanine nucleotide exchange factor 10 Neighboring gene CLN8 transmembrane ER and ERGIC protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myomesin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429212.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    4443016..4557420 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040733604.1 → XP_040589538.1  myomesin-2 isoform X5

    UniProtKB/TrEMBL
    A0A3Q0D722
    Conserved Domains (7) summary
    cd05891
    Location:1344 → 1435
    IgI_M-protein_C; C-terminal immunoglobulin (Ig)-like domain of M-protein; member of the I-set of Ig superfamily (IgSF) domains
    PHA02826
    Location:1237 → 1432
    PHA02826; IL-1 receptor-like protein; Provisional
    smart00410
    Location:940 → 995
    IG_like; Immunoglobulin like
    cd00063
    Location:383 → 475
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00096
    Location:295 → 299
    Ig; Ig strand B [structural motif]
    cd20951
    Location:154 → 247
    IgI_titin_I1-like; Immunoglobulin domain I1 of the titin I-band and similar proteins; a member of the I-set of IgSF domains
    cl11960
    Location:290 → 372
    Ig; Immunoglobulin domain

  2. XM_040733605.1 → XP_040589539.1  myomesin-2 isoform X5

    UniProtKB/TrEMBL
    A0A3Q0D722
    Conserved Domains (7) summary
    cd05891
    Location:1344 → 1435
    IgI_M-protein_C; C-terminal immunoglobulin (Ig)-like domain of M-protein; member of the I-set of Ig superfamily (IgSF) domains
    PHA02826
    Location:1237 → 1432
    PHA02826; IL-1 receptor-like protein; Provisional
    smart00410
    Location:940 → 995
    IG_like; Immunoglobulin like
    cd00063
    Location:383 → 475
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00096
    Location:295 → 299
    Ig; Ig strand B [structural motif]
    cd20951
    Location:154 → 247
    IgI_titin_I1-like; Immunoglobulin domain I1 of the titin I-band and similar proteins; a member of the I-set of IgSF domains
    cl11960
    Location:290 → 372
    Ig; Immunoglobulin domain

  3. XM_021234414.2 → XP_021090073.2  myomesin-2 isoform X3

    Related
    ENSMAUP00000004975.2, ENSMAUT00000008169.2
    Conserved Domains (5) summary
    cd05891
    Location:1385 → 1476
    IgI_M-protein_C; C-terminal immunoglobulin (Ig)-like domain of M-protein; member of the I-set of Ig superfamily (IgSF) domains
    PHA02826
    Location:1278 → 1473
    PHA02826; IL-1 receptor-like protein; Provisional
    smart00409
    Location:202 → 287
    IG; Immunoglobulin
    smart00410
    Location:331 → 413
    IG_like; Immunoglobulin like
    cd00063
    Location:424 → 516
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  4. XM_021234413.2 → XP_021090072.2  myomesin-2 isoform X2

    Conserved Domains (5) summary
    cd05891
    Location:1394 → 1485
    IgI_M-protein_C; C-terminal immunoglobulin (Ig)-like domain of M-protein; member of the I-set of Ig superfamily (IgSF) domains
    PHA02826
    Location:1287 → 1482
    PHA02826; IL-1 receptor-like protein; Provisional
    smart00409
    Location:211 → 296
    IG; Immunoglobulin
    smart00410
    Location:340 → 422
    IG_like; Immunoglobulin like
    cd00063
    Location:433 → 525
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  5. XM_021234412.2 → XP_021090071.2  myomesin-2 isoform X1

    Related
    ENSMAUP00000044400.1, ENSMAUT00000043526.1
    Conserved Domains (5) summary
    cd05891
    Location:1395 → 1486
    IgI_M-protein_C; C-terminal immunoglobulin (Ig)-like domain of M-protein; member of the I-set of Ig superfamily (IgSF) domains
    PHA02826
    Location:1288 → 1483
    PHA02826; IL-1 receptor-like protein; Provisional
    smart00409
    Location:212 → 297
    IG; Immunoglobulin
    smart00410
    Location:341 → 423
    IG_like; Immunoglobulin like
    cd00063
    Location:434 → 526
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  6. XM_021234415.2 → XP_021090074.2  myomesin-2 isoform X4

    Conserved Domains (5) summary
    cd05891
    Location:1384 → 1475
    IgI_M-protein_C; C-terminal immunoglobulin (Ig)-like domain of M-protein; member of the I-set of Ig superfamily (IgSF) domains
    PHA02826
    Location:1277 → 1472
    PHA02826; IL-1 receptor-like protein; Provisional
    smart00409
    Location:201 → 286
    IG; Immunoglobulin
    smart00410
    Location:330 → 412
    IG_like; Immunoglobulin like
    cd00063
    Location:423 → 515
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  7. XM_021234417.2 → XP_021090076.1  myomesin-2 isoform X5

    UniProtKB/TrEMBL
    A0A3Q0D722
    Conserved Domains (7) summary
    cd05891
    Location:1344 → 1435
    IgI_M-protein_C; C-terminal immunoglobulin (Ig)-like domain of M-protein; member of the I-set of Ig superfamily (IgSF) domains
    PHA02826
    Location:1237 → 1432
    PHA02826; IL-1 receptor-like protein; Provisional
    smart00410
    Location:940 → 995
    IG_like; Immunoglobulin like
    cd00063
    Location:383 → 475
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00096
    Location:295 → 299
    Ig; Ig strand B [structural motif]
    cd20951
    Location:154 → 247
    IgI_titin_I1-like; Immunoglobulin domain I1 of the titin I-band and similar proteins; a member of the I-set of IgSF domains
    cl11960
    Location:290 → 372
    Ig; Immunoglobulin domain

  8. XM_021234416.2 → XP_021090075.1  myomesin-2 isoform X5

    UniProtKB/TrEMBL
    A0A3Q0D722
    Related
    ENSMAUP00000042332.1, ENSMAUT00000031454.1
    Conserved Domains (7) summary
    cd05891
    Location:1344 → 1435
    IgI_M-protein_C; C-terminal immunoglobulin (Ig)-like domain of M-protein; member of the I-set of Ig superfamily (IgSF) domains
    PHA02826
    Location:1237 → 1432
    PHA02826; IL-1 receptor-like protein; Provisional
    smart00410
    Location:940 → 995
    IG_like; Immunoglobulin like
    cd00063
    Location:383 → 475
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00096
    Location:295 → 299
    Ig; Ig strand B [structural motif]
    cd20951
    Location:154 → 247
    IgI_titin_I1-like; Immunoglobulin domain I1 of the titin I-band and similar proteins; a member of the I-set of IgSF domains
    cl11960
    Location:290 → 372
    Ig; Immunoglobulin domain
Nucleotide Protein
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