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Ptov1 PTOV1 extended AT-hook containing adaptor protein [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101830384, updated on 8-Mar-2024

Summary

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Gene symbol
Ptov1
Gene description
PTOV1 extended AT-hook containing adaptor protein
See related
EnsemblRapid:ENSMAUG00000036004
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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See Ptov1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429231.1 (1708537..1714905, complement)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801779.1 (2030924..2037803)

NW_024429231.1Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 17 Neighboring gene AKT1 substrate 1 Neighboring gene polynucleotide kinase 3'-phosphatase Neighboring gene mediator complex subunit 25 Neighboring gene 40S ribosomal protein S26-like Neighboring gene fuzzy planar cell polarity protein Neighboring gene adaptor related protein complex 2 subunit alpha 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prostate tumor-overexpressed gene 1 protein
Names
prostate tumor overexpressed 1
prostate tumor-overexpressed gene 1 protein homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429231.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    1708537..1714905 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005084754.4 → XP_005084811.1  prostate tumor-overexpressed gene 1 protein

    UniProtKB/TrEMBL
    A0A1U7RDC9
    Related
    ENSMAUP00000058898.1, ENSMAUT00000059801.1
    Conserved Domains (1) summary
    pfam11232
    Location:93 → 238
    Med25; Mediator complex subunit 25 PTOV activation and synapsin 2

RNA

  1. XR_002385980.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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