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A3galt2 alpha 1,3-galactosyltransferase 2 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101829635, updated on 8-Mar-2024

Summary

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Gene symbol
A3galt2
Gene description
alpha 1,3-galactosyltransferase 2
See related
EnsemblRapid:ENSMAUG00000036113
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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See A3galt2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429197.1 (14317007..14328629, complement)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801696.1 (2100714..2112201)

NW_024429197.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121143925 Neighboring gene tripartite motif containing 62 Neighboring gene zinc finger protein 362 Neighboring gene uncharacterized LOC121143926 Neighboring gene polyhomeotic homolog 2 Neighboring gene toll-like receptor 12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429197.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    14317007..14328629 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021232693.2 → XP_021088352.1  alpha-1,3-galactosyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A3Q0D554
    Related
    ENSMAUP00000055780.1, ENSMAUT00000079700.1
    Conserved Domains (1) summary
    cd02515
    Location:55 → 326
    Glyco_transf_6; Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens

  2. XM_005079474.3 → XP_005079531.2  alpha-1,3-galactosyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A1U7R263
    Related
    ENSMAUP00000053739.1, ENSMAUT00000062792.1
    Conserved Domains (1) summary
    cd02515
    Location:83 → 354
    Glyco_transf_6; Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens
Nucleotide Protein
Heading Accession and Version

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