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Alg9 ALG9 alpha-1,2-mannosyltransferase [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101829066, updated on 8-Mar-2024

Summary

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Gene symbol
Alg9
Gene description
ALG9 alpha-1,2-mannosyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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See Alg9 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429203.1 (29437897..29508097)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801622.1 (13385182..13454965)

NW_024429203.1Genomic Context describing neighboring genes Neighboring gene cilia and flagella associated protein 68 Neighboring gene ferredoxin-fold anticodon binding domain containing 1 Neighboring gene protein phosphatase 2 scaffold subunit Abeta Neighboring gene U6 spliceosomal RNA Neighboring gene salt inducible kinase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,2-mannosyltransferase ALG9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429203.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    29437897..29508097
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005069520.4 → XP_005069577.1  alpha-1,2-mannosyltransferase ALG9 isoform X1

    UniProtKB/TrEMBL
    A0A1U7QAG3
    Conserved Domains (1) summary
    pfam03901
    Location:60 → 482
    Glyco_transf_22; Alg9-like mannosyltransferase family

  2. XM_013113013.3 → XP_012968467.1  alpha-1,2-mannosyltransferase ALG9 isoform X2

    UniProtKB/TrEMBL
    A0A1U8BMQ2
    Conserved Domains (1) summary
    cl21590
    Location:1 → 311
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

RNA

  1. XR_001196443.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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