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Bicc1 BicC family RNA binding protein 1 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101828708, updated on 8-Mar-2024

Summary

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Gene symbol
Bicc1
Gene description
BicC family RNA binding protein 1
See related
EnsemblRapid:ENSMAUG00000018772
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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See Bicc1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429208.1 (14412228..14624466)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801628.1 (8120717..8375943)

NW_024429208.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L23a-like Neighboring gene transcription factor A, mitochondrial Neighboring gene uncharacterized LOC121134209 Neighboring gene uncharacterized LOC110341007 Neighboring gene uncharacterized LOC121134324 Neighboring gene uncharacterized LOC121134323

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing and development of an expression microarray platform for liver infection in adenovirus type 5-infected Syrian golden hamsters. Ying B, et al. Virology, 2015 Nov. PMID 26319212, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: protein bicaudal C homolog 1
Names
bicaudal C homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429208.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    14412228..14624466
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005070782.4 → XP_005070839.1  LOW QUALITY PROTEIN: protein bicaudal C homolog 1

    UniProtKB/TrEMBL
    A0A1U7QMQ5, A0A1U8BTH0
    Related
    ENSMAUP00000020884.1, ENSMAUT00000024878.2
    Conserved Domains (3) summary
    cd09520
    Location:872 → 935
    SAM_BICC1; SAM domain of BICC1 (bicaudal) subfamily
    smart00454
    Location:875 → 932
    SAM; Sterile alpha motif
    cd02394
    Location:134 → 200
    vigilin_like_KH; K homology RNA-binding domain_vigilin_like. The vigilin family is a large and extended family of multiple KH-domain proteins, including vigilin, also called high density lipoprotein binding protien (HBP), fungal Scp160 and bicaudal-C. Yeast Scp160p has ...
Nucleotide Protein Strain
Heading Accession and Version

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