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Rnaseh2b ribonuclease H2 subunit B [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101823740, updated on 8-Mar-2024

Summary

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Gene symbol
Rnaseh2b
Gene description
ribonuclease H2 subunit B
See related
EnsemblRapid:ENSMAUG00000016520
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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See Rnaseh2b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429269.1 (6017112..6070177, complement)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801657.1 (6103952..6156985, complement)

NW_024429269.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown C13orf42 homolog Neighboring gene guanylate cyclase soluble subunit beta-2 Neighboring gene deleted in lymphocytic leukemia 7 Neighboring gene acidic leucine-rich nuclear phosphoprotein 32 family member B-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing and development of an expression microarray platform for liver infection in adenovirus type 5-infected Syrian golden hamsters. Ying B, et al. Virology, 2015 Nov. PMID 26319212, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in RNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribonucleotide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonuclease H2 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribonuclease H2 subunit B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429269.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    6017112..6070177 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021230231.2 → XP_021085890.1  ribonuclease H2 subunit B isoform X3

    UniProtKB/TrEMBL
    A0A3Q0CU14
    Conserved Domains (1) summary
    pfam09468
    Location:16 → 226
    RNase_H2-Ydr279; Ydr279p protein family (RNase H2 complex component)

  2. XM_013117204.3 → XP_012972658.1  ribonuclease H2 subunit B isoform X2

    UniProtKB/TrEMBL
    A0A1U8CA37
    Conserved Domains (1) summary
    cd09270
    Location:16 → 271
    RNase_H2-B; Ribonuclease H2-B is a subunit of the eukaryotic RNase H complex which cleaves RNA-DNA hybrids

  3. XM_005075283.4 → XP_005075340.1  ribonuclease H2 subunit B isoform X1

    UniProtKB/TrEMBL
    A0A1U7QJM6
    Related
    ENSMAUP00000052598.1, ENSMAUT00000072287.1
    Conserved Domains (1) summary
    cd09270
    Location:16 → 298
    RNase_H2-B; Ribonuclease H2-B is a subunit of the eukaryotic RNase H complex which cleaves RNA-DNA hybrids
Nucleotide Protein Strain
Heading Accession and Version

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