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KDSR 3-ketodihydrosphingosine reductase [ Ficedula albicollis (Collared flycatcher) ]

Gene ID: 101809967, updated on 3-Aug-2024

Summary

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Gene symbol
KDSR
Gene description
3-ketodihydrosphingosine reductase
Gene type
protein coding
RefSeq status
MODEL
Organism
Ficedula albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Ficedula
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See KDSR in Genome Data Viewer
Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
101 current FicAlb1.5 (GCF_000247815.1) 2 NC_021673.1 (71703613..71726411)

Chromosome 2 - NC_021673.1Genomic Context describing neighboring genes Neighboring gene serpin family B member 5 Neighboring gene vacuolar protein sorting 4 homolog B Neighboring gene BCL2 apoptosis regulator Neighboring gene MARVEL domain-containing protein 3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021673.1 Chromosome 2 Reference FicAlb1.5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-dehydrosphinganine reductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 3-keto-sphinganine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3-ketodihydrosphingosine reductase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ficedula albicollis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference FicAlb1.5 Primary Assembly

Genomic

  1. NC_021673.1 Reference FicAlb1.5 Primary Assembly

    Range
    71703613..71726411
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005041611.1 → XP_005041668.1  3-ketodihydrosphingosine reductase

    Conserved Domains (2) summary
    cd08939
    Location:7 → 243
    KDSR-like_SDR_c; 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR
    pfam00106
    Location:9 → 207
    adh_short; short chain dehydrogenase
Nucleotide Protein
Heading Accession and Version

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