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GALE UDP-galactose-4-epimerase [ Ficedula albicollis (Collared flycatcher) ]

Gene ID: 101809278, updated on 3-Aug-2024

Summary

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Gene symbol
GALE
Gene description
UDP-galactose-4-epimerase
See related
Ensembl:ENSFALG00000000514
Gene type
protein coding
RefSeq status
MODEL
Organism
Ficedula albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Ficedula
Orthologs
human mouse all
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Genomic context

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See GALE in Genome Data Viewer
Location:
chromosome: 23
Exon count:
10
Annotation release Status Assembly Chr Location
101 current FicAlb1.5 (GCF_000247815.1) 23 NC_021694.1 (6442015..6446317, complement)

Chromosome 23 - NC_021694.1Genomic Context describing neighboring genes Neighboring gene PITH domain containing 1 Neighboring gene lysophospholipase 2 Neighboring gene 3-hydroxy-3-methylglutaryl-CoA lyase Neighboring gene alpha-L-fucosidase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021694.1 Chromosome 23 Reference FicAlb1.5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucose 4-epimerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactose catabolic process via UDP-galactose IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glucose 4-epimerase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ficedula albicollis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference FicAlb1.5 Primary Assembly

Genomic

  1. NC_021694.1 Reference FicAlb1.5 Primary Assembly

    Range
    6442015..6446317 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005058190.1 → XP_005058247.1  UDP-glucose 4-epimerase

    UniProtKB/TrEMBL
    A0A803VV15, U3JCM4
    Related
    ENSFALP00000000528.1, ENSFALT00000000532.2
    Conserved Domains (2) summary
    cd05247
    Location:4 → 338
    UDP_G4E_1_SDR_e; UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs
    TIGR01179
    Location:4 → 340
    galE; UDP-glucose-4-epimerase GalE
Nucleotide Protein
Heading Accession and Version

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