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ATP6V0A2 ATPase H+ transporting V0 subunit a2 [ Ficedula albicollis (Collared flycatcher) ]

Gene ID: 101806637, updated on 3-Aug-2024

Summary

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Gene symbol
ATP6V0A2
Gene description
ATPase H+ transporting V0 subunit a2
See related
Ensembl:ENSFALG00000009325
Gene type
protein coding
RefSeq status
MODEL
Organism
Ficedula albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Ficedula
Orthologs
human mouse all
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Genomic context

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See ATP6V0A2 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
22
Annotation release Status Assembly Chr Location
101 current FicAlb1.5 (GCF_000247815.1) 15 NC_021687.1 (2465108..2481732, complement)

Chromosome 15 - NC_021687.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 92 Neighboring gene dynein axonemal heavy chain 10 Neighboring gene tectonic family member 2 Neighboring gene general transcription factor IIH subunit 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021687.1 Chromosome 15 Reference FicAlb1.5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vacuolar acidification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of vacuolar proton-transporting V-type ATPase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of vacuolar proton-transporting V-type ATPase, V0 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase 116 kDa subunit a
Names
ATPase, H+ transporting, lysosomal V0 subunit a2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ficedula albicollis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference FicAlb1.5 Primary Assembly

Genomic

  1. NC_021687.1 Reference FicAlb1.5 Primary Assembly

    Range
    2465108..2481732 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005055165.2 → XP_005055222.1  V-type proton ATPase 116 kDa subunit a

    UniProtKB/TrEMBL
    U3K3W8
    Related
    ENSFALP00000009722.1, ENSFALT00000009762.2
    Conserved Domains (2) summary
    COG1269
    Location:26 → 838
    NtpI; Archaeal/vacuolar-type H+-ATPase subunit I/STV1 [Energy production and conversion]
    pfam01496
    Location:28 → 837
    V_ATPase_I; V-type ATPase 116kDa subunit family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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