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Rif1 replication timing regulatory factor 1 [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 101787829, updated on 8-Mar-2024

Summary

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Gene symbol
Rif1
Gene description
replication timing regulatory factor 1
See related
Ensembl:ENSCPOG00000037898
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
human mouse all
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Genomic context

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See Rif1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
36
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947495.1 (41148400..41216123)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176416.1 (36330176..36392852, complement)

NW_026947495.1Genomic Context describing neighboring genes Neighboring gene endogenous retrovirus group K member 13-1 Env polyprotein-like Neighboring gene TNF alpha induced protein 6 Neighboring gene nebulin Neighboring gene small nucleolar RNA SNORA8 Neighboring gene ARF like GTPase 5A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in telomere maintenance IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
telomere-associated protein RIF1
Names
RAP1 interacting factor homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947495.1 Reference mCavPor4.1

    Range
    41148400..41216123
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063259058.1 → XP_063115128.1  telomere-associated protein RIF1 isoform X1

  2. XM_063259060.1 → XP_063115130.1  telomere-associated protein RIF1 isoform X3

  3. XM_063259059.1 → XP_063115129.1  telomere-associated protein RIF1 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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