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LOC101768855 beta-fructofuranosidase, insoluble isoenzyme 3 [ Setaria italica (foxtail millet) ]

Gene ID: 101768855, updated on 21-Dec-2023

Summary

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Gene symbol
LOC101768855
Gene description
beta-fructofuranosidase, insoluble isoenzyme 3
Locus tag
SETIT_012687mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Setaria italica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Genomic context

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See LOC101768855 in Genome Data Viewer
Location:
chromosome: VII
Exon count:
4
Annotation release Status Assembly Chr Location
103 current Setaria_italica_v2.0 (GCF_000263155.2) VII NC_028456.1 (19530617..19532993)
101 previous assembly Setaria V1 (GCF_000263155.1) Unplaced Scaffold NW_004675967.1 (19530556..19532993)

Chromosome VII - NC_028456.1Genomic Context describing neighboring genes Neighboring gene beta-fructofuranosidase, insoluble isoenzyme 2 Neighboring gene beta-fructofuranosidase, insoluble isoenzyme 2 Neighboring gene 40S ribosomal protein S14 Neighboring gene putative hydrolase C777.06c

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-fructofuranosidase, insoluble isoenzyme 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Setaria italica Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Setaria_italica_v2.0 Primary Assembly

Genomic

  1. NC_028456.1 Reference Setaria_italica_v2.0 Primary Assembly

    Range
    19530617..19532993
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014805529.1 → XP_014661015.1  beta-fructofuranosidase, insoluble isoenzyme 3

    UniProtKB/TrEMBL
    A0A368RTU3, K3YEM2
    Conserved Domains (3) summary
    smart00640
    Location:45 → 528
    Glyco_32; Glycosyl hydrolases family 32
    pfam00251
    Location:45 → 368
    Glyco_hydro_32N; Glycosyl hydrolases family 32 N-terminal domain
    pfam08244
    Location:441 → 528
    Glyco_hydro_32C; Glycosyl hydrolases family 32 C terminal
Nucleotide Protein Strain
Heading Accession and Version

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