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LOC101754440 laccase-13 [ Setaria italica (foxtail millet) ]

Gene ID: 101754440, updated on 21-Dec-2023

Summary

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Gene symbol
LOC101754440
Gene description
laccase-13
Locus tag
SETIT_021577mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Setaria italica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Genomic context

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See LOC101754440 in Genome Data Viewer
Location:
chromosome: III
Exon count:
3
Annotation release Status Assembly Chr Location
103 current Setaria_italica_v2.0 (GCF_000263155.2) III NC_028452.1 (17634485..17637014, complement)
101 previous assembly Setaria V1 (GCF_000263155.1) Unplaced Scaffold NW_004675963.1 (17635113..17637630, complement)

Chromosome III - NC_028452.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111256851 Neighboring gene transcription factor MYB3R-2 Neighboring gene uncharacterized LOC111256846 Neighboring gene probable glucuronosyltransferase Os01g0926700

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydroquinone:oxygen oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lignin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apoplast IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laccase-13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Setaria italica Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Setaria_italica_v2.0 Primary Assembly

Genomic

  1. NC_028452.1 Reference Setaria_italica_v2.0 Primary Assembly

    Range
    17634485..17637014 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004961802.2 → XP_004961859.1  laccase-13

    UniProtKB/TrEMBL
    K3Z4V9
    Conserved Domains (1) summary
    TIGR03389
    Location:28 → 585
    laccase; laccase, plant
Nucleotide Protein Strain
Heading Accession and Version

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