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Hs3st-B Heparan sulfate 3-O sulfotransferase-B [ Bombyx mori (domestic silkworm) ]

Gene ID: 101745633, updated on 22-May-2024

Summary

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Gene symbol
Hs3st-B
Gene description
Heparan sulfate 3-O sulfotransferase-B
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombyx mori
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx
Orthologs
fruit fly all
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Genomic context

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See Hs3st-B in Genome Data Viewer
Location:
chromosome: 17
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_01 current ASM3026992v2 (GCF_030269925.1) 17 NC_085123.1 (12029850..12036495)
103 previous assembly Bmori_2016v1.0 (GCF_014905235.1) 17 NC_051374.1 (11995970..12002572)

Chromosome 17 - NC_085123.1Genomic Context describing neighboring genes Neighboring gene hydroxyacylglutathione hydrolase, mitochondrial Neighboring gene uncharacterized LOC101735765 Neighboring gene uncharacterized LOC134200470 Neighboring gene uncharacterized LOC134200471 Neighboring gene tRNA splicing endonuclease subunit 54 Neighboring gene CRK like proto-oncogene, adaptor protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptomic analysis of developmental features of Bombyx mori wing disc during metamorphosis. Ou J, et al. BMC Genomics, 2014 Sep 27. PMID 25261999, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 3B1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030269925.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3026992v2 Primary Assembly

Genomic

  1. NC_085123.1 Reference ASM3026992v2 Primary Assembly

    Range
    12029850..12036495
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012695837.4 → XP_012551291.1  heparan sulfate glucosamine 3-O-sulfotransferase 3B1

    UniProtKB/TrEMBL
    A0A8R2GCT8
    Conserved Domains (1) summary
    pfam00685
    Location:83 → 322
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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