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LOC101744621 chitin synthase chs-2 [ Bombyx mori (domestic silkworm) ]

Gene ID: 101744621, updated on 26-Jun-2024

Summary

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Gene symbol
LOC101744621
Gene description
chitin synthase chs-2
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombyx mori
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx
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Genomic context

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See LOC101744621 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2024_01 current ASM3026992v2 (GCF_030269925.1) 4 NC_085110.1 (11017214..11045637)
103 previous assembly Bmori_2016v1.0 (GCF_014905235.1) 4 NC_051361.1 (10797470..10825812)

Chromosome 4 - NC_085110.1Genomic Context describing neighboring genes Neighboring gene Nfs1 cysteine desulfurase Neighboring gene MPN domain-containing protein CG4751 Neighboring gene microRNA mir-2779 Neighboring gene hyaluronan synthase-like protein kkv Neighboring gene uncharacterized LOC134198786 Neighboring gene COP9 signalosome subunit 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Chitin synthase B: a midgut-specific gene induced by insect hormones and involved in food intake in Bombyx mori larvae. Zhuo W, et al. Arch Insect Biochem Physiol, 2014 Jan. PMID 24338669
  2. Transcriptomic analysis of developmental features of Bombyx mori wing disc during metamorphosis. Ou J, et al. BMC Genomics, 2014 Sep 27. PMID 25261999, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chitin synthase chs-2
Names
chitin synthase B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030269925.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3026992v2 Primary Assembly

Genomic

  1. NC_085110.1 Reference ASM3026992v2 Primary Assembly

    Range
    11017214..11045637
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038010652.2 → XP_037866580.1  chitin synthase chs-2

    UniProtKB/TrEMBL
    A0A8R2LTE0
    Conserved Domains (1) summary
    cd04190
    Location:560 → 882
    Chitin_synth_C; C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin

  2. XM_038010653.2 → XP_037866581.1  chitin synthase chs-2

    UniProtKB/TrEMBL
    A0A8R2LTE0
    Conserved Domains (1) summary
    cd04190
    Location:560 → 882
    Chitin_synth_C; C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin
Nucleotide Protein
Heading Accession and Version

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