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LOC101743934 mitochondrial basic amino acids transporter [ Bombyx mori (domestic silkworm) ]

Gene ID: 101743934, updated on 9-Feb-2024

Summary

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Gene symbol
LOC101743934
Gene description
mitochondrial basic amino acids transporter
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombyx mori
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx
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Genomic context

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See LOC101743934 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_01 current ASM3026992v2 (GCF_030269925.1) 12 NC_085118.1 (12002714..12004858, complement)
103 previous assembly Bmori_2016v1.0 (GCF_014905235.1) 12 NC_051369.1 (12000154..12001978, complement)

Chromosome 12 - NC_085118.1Genomic Context describing neighboring genes Neighboring gene ethanolaminephosphotransferase 1 Neighboring gene microRNA mir-2780a-2 Neighboring gene lysine ketoglutarate reductase/saccharopine dehydrogenase Neighboring gene kelch-like protein 10 Neighboring gene uncharacterized LOC119629248 Neighboring gene uncharacterized LOC119629304 Neighboring gene zinc finger protein 271 Neighboring gene Synthesis of cytochrome c oxidase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Large scale full-length cDNA sequencing reveals a unique genomic landscape in a lepidopteran model insect, Bombyx mori. Suetsugu Y, et al. G3 (Bethesda), 2013 Sep 4. PMID 23821615, Free PMC Article
  2. Transcriptomic analysis of developmental features of Bombyx mori wing disc during metamorphosis. Ou J, et al. BMC Genomics, 2014 Sep 27. PMID 25261999, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables high-affinity L-arginine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial basic amino acids transporter

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030269925.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3026992v2 Primary Assembly

Genomic

  1. NC_085118.1 Reference ASM3026992v2 Primary Assembly

    Range
    12002714..12004858 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004926488.3 → XP_004926545.1  mitochondrial basic amino acids transporter isoform X1

    UniProtKB/TrEMBL
    A0A8R1WJV2
    Conserved Domains (1) summary
    pfam00153
    Location:172 → 252
    Mito_carr; Mitochondrial carrier protein

  2. XM_021348250.3 → XP_021203925.1  mitochondrial basic amino acids transporter isoform X2

    UniProtKB/TrEMBL
    A0A8R2DLL4
    Conserved Domains (1) summary
    pfam00153
    Location:131 → 211
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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