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PIG-V phosphatidylinositol glycan anchor biosynthesis class V [ Bombyx mori (domestic silkworm) ]

Gene ID: 101742553, updated on 15-May-2024

Summary

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Gene symbol
PIG-V
Gene description
phosphatidylinositol glycan anchor biosynthesis class V
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombyx mori
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx
Orthologs
fruit fly all
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Genomic context

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See PIG-V in Genome Data Viewer
Location:
chromosome: 21
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_01 current ASM3026992v2 (GCF_030269925.1) 21 NC_085127.1 (9254255..9257863)
103 previous assembly Bmori_2016v1.0 (GCF_014905235.1) 21 NC_051378.1 (9256442..9260025)

Chromosome 21 - NC_085127.1Genomic Context describing neighboring genes Neighboring gene Cyclin-dependent kinase 7 Neighboring gene tubulin polyglutamylase TTLL13 Neighboring gene ubiquilin-1 Neighboring gene uncharacterized LOC119630088 Neighboring gene methyl-CpG-binding domain protein 2 Neighboring gene uncharacterized LOC134200860 Neighboring gene ATPase phospholipid transporting 8B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Large scale full-length cDNA sequencing reveals a unique genomic landscape in a lepidopteran model insect, Bombyx mori. Suetsugu Y, et al. G3 (Bethesda), 2013 Sep 4. PMID 23821615, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of mannosyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030269925.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3026992v2 Primary Assembly

Genomic

  1. NC_085127.1 Reference ASM3026992v2 Primary Assembly

    Range
    9254255..9257863
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038018341.2 → XP_037874269.1  GPI mannosyltransferase 2

    UniProtKB/TrEMBL
    A0A8R2M776
    Conserved Domains (1) summary
    cl21590
    Location:5 → 532
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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