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PIG-B phosphatidylinositol glycan anchor biosynthesis class B [ Bombyx mori (domestic silkworm) ]

Gene ID: 101736651, updated on 16-May-2024

Summary

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Gene symbol
PIG-B
Gene description
phosphatidylinositol glycan anchor biosynthesis class B
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombyx mori
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx
Orthologs
fruit fly all
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Genomic context

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See PIG-B in Genome Data Viewer
Location:
chromosome: 14
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_01 current ASM3026992v2 (GCF_030269925.1) 14 NC_085120.1 (10907461..10919333, complement)
103 previous assembly Bmori_2016v1.0 (GCF_014905235.1) 14 NC_051371.1 (10923084..10934964, complement)

Chromosome 14 - NC_085120.1Genomic Context describing neighboring genes Neighboring gene hemicentin-1 Neighboring gene titin Neighboring gene uncharacterized LOC101736307 Neighboring gene centromere/kinetochore protein zw10 Neighboring gene centrosomal protein 97kDa Neighboring gene peptidyl-prolyl cis-trans isomerase D

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptomic analysis of developmental features of Bombyx mori wing disc during metamorphosis. Ou J, et al. BMC Genomics, 2014 Sep 27. PMID 25261999, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030269925.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3026992v2 Primary Assembly

Genomic

  1. NC_085120.1 Reference ASM3026992v2 Primary Assembly

    Range
    10907461..10919333 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038015523.2 → XP_037871451.1  GPI mannosyltransferase 3

    UniProtKB/TrEMBL
    A0A8R1WHX9
    Conserved Domains (1) summary
    cl21590
    Location:11 → 404
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_004923740.5 → XP_004923797.2  GPI mannosyltransferase 3

    UniProtKB/TrEMBL
    A0A8R1WHX9
    Conserved Domains (1) summary
    cl21590
    Location:11 → 404
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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Gene LinkOut

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