U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Hs2st Heparan sulfate 2-O-sulfotransferase [ Bombyx mori (domestic silkworm) ]

Gene ID: 101736578, updated on 23-May-2024

Summary

Go to the top of the page Help
Gene symbol
Hs2st
Gene description
Heparan sulfate 2-O-sulfotransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombyx mori
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx
Orthologs
fruit fly all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Hs2st in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_01 current ASM3026992v2 (GCF_030269925.1) 4 NC_085110.1 (1921386..1931955, complement)
103 previous assembly Bmori_2016v1.0 (GCF_014905235.1) 4 NC_051361.1 (1733793..1741042, complement)

Chromosome 4 - NC_085110.1Genomic Context describing neighboring genes Neighboring gene adenylate kinase isoenzyme 5 Neighboring gene transfer RNA isoleucine (anticodon AAU) Neighboring gene uncharacterized LOC134198727 Neighboring gene E3 ubiquitin-protein ligase TRIM45 Neighboring gene mediator complex subunit 15

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Transcriptomic analysis of developmental features of Bombyx mori wing disc during metamorphosis. Ou J, et al. BMC Genomics, 2014 Sep 27. PMID 25261999, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 2-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
heparin sulfate O-sulfotransferase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_030269925.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3026992v2 Primary Assembly

Genomic

  1. NC_085110.1 Reference ASM3026992v2 Primary Assembly

    Range
    1921386..1931955 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038021811.2 → XP_037877739.1  heparin sulfate O-sulfotransferase

    UniProtKB/TrEMBL
    A0A8R2MA20
    Conserved Domains (1) summary
    pfam03567
    Location:59 → 314
    Sulfotransfer_2; Sulfotransferase family

RNA

  1. XR_005246616.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials