U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Pgant9 polypeptide N-acetylgalactosaminyltransferase 9 [ Bombyx mori (domestic silkworm) ]

Gene ID: 101736088, updated on 22-May-2024

Summary

Go to the top of the page Help
Gene symbol
Pgant9
Gene description
polypeptide N-acetylgalactosaminyltransferase 9
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombyx mori
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx
Orthologs
fruit fly all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Pgant9 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_01 current ASM3026992v2 (GCF_030269925.1) 8 NC_085114.1 (5262011..5465067)
103 previous assembly Bmori_2016v1.0 (GCF_014905235.1) 8 NC_051365.1 (5232771..5435916)

Chromosome 8 - NC_085114.1Genomic Context describing neighboring genes Neighboring gene cuticular protein RR-1 motif 2 Neighboring gene cuticular protein RR-1 motif 3 Neighboring gene uncharacterized LOC101736308 Neighboring gene transfer RNA asparagine (anticodon GUU) Neighboring gene putative polypeptide N-acetylgalactosaminyltransferase 9

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Large scale full-length cDNA sequencing reveals a unique genomic landscape in a lepidopteran model insect, Bombyx mori. Suetsugu Y, et al. G3 (Bethesda), 2013 Sep 4. PMID 23821615, Free PMC Article
  2. Transcriptomic analysis of developmental features of Bombyx mori wing disc during metamorphosis. Ou J, et al. BMC Genomics, 2014 Sep 27. PMID 25261999, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polypeptide N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
putative polypeptide N-acetylgalactosaminyltransferase 9

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_030269925.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3026992v2 Primary Assembly

Genomic

  1. NC_085114.1 Reference ASM3026992v2 Primary Assembly

    Range
    5262011..5465067
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004924075.4 → XP_004924132.1  putative polypeptide N-acetylgalactosaminyltransferase 9 isoform X3

    See identical proteins and their annotated locations for XP_004924132.1

    UniProtKB/TrEMBL
    A0A8R2AL18
    Conserved Domains (4) summary
    cd02510
    Location:163 → 461
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG0463
    Location:158 → 370
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cd00161
    Location:474 → 592
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:472 → 590
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_021346651.3 → XP_021202326.1  putative polypeptide N-acetylgalactosaminyltransferase 9 isoform X1

    UniProtKB/TrEMBL
    A0A8R2C508
    Conserved Domains (2) summary
    cd02510
    Location:178 → 476
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:487 → 605
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  3. XM_062669677.1 → XP_062525661.1  putative polypeptide N-acetylgalactosaminyltransferase 9 isoform X1

    UniProtKB/TrEMBL
    A0A8R2C508

  4. XM_012688635.4 → XP_012544089.1  putative polypeptide N-acetylgalactosaminyltransferase 9 isoform X1

    See identical proteins and their annotated locations for XP_012544089.1

    UniProtKB/TrEMBL
    A0A8R2C508
    Conserved Domains (2) summary
    cd02510
    Location:178 → 476
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:487 → 605
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  5. XM_012688638.4 → XP_012544092.1  putative polypeptide N-acetylgalactosaminyltransferase 9 isoform X2

    UniProtKB/TrEMBL
    A0A8R2C511
    Conserved Domains (4) summary
    cd02510
    Location:178 → 476
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG0463
    Location:173 → 385
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cd00161
    Location:495 → 606
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:487 → 604
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  6. XM_012688639.4 → XP_012544093.1  putative polypeptide N-acetylgalactosaminyltransferase 9 isoform X3

    See identical proteins and their annotated locations for XP_012544093.1

    UniProtKB/TrEMBL
    A0A8R2AL18
    Conserved Domains (4) summary
    cd02510
    Location:163 → 461
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG0463
    Location:158 → 370
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cd00161
    Location:474 → 592
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:472 → 590
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  7. XM_062669681.1 → XP_062525665.1  putative polypeptide N-acetylgalactosaminyltransferase 9 isoform X4

  8. XM_062669682.1 → XP_062525666.1  putative polypeptide N-acetylgalactosaminyltransferase 9 isoform X4

  9. XM_012688637.4 → XP_012544091.1  putative polypeptide N-acetylgalactosaminyltransferase 9 isoform X1

    See identical proteins and their annotated locations for XP_012544091.1

    UniProtKB/TrEMBL
    A0A8R2C508
    Conserved Domains (2) summary
    cd02510
    Location:178 → 476
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:487 → 605
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  10. XM_062669678.1 → XP_062525662.1  putative polypeptide N-acetylgalactosaminyltransferase 9 isoform X2

    UniProtKB/TrEMBL
    A0A8R2C511

  11. XM_062669680.1 → XP_062525664.1  putative polypeptide N-acetylgalactosaminyltransferase 9 isoform X3

    UniProtKB/TrEMBL
    A0A8R2AL18

  12. XM_012688636.4 → XP_012544090.1  putative polypeptide N-acetylgalactosaminyltransferase 9 isoform X1

    See identical proteins and their annotated locations for XP_012544090.1

    UniProtKB/TrEMBL
    A0A8R2C508
    Conserved Domains (2) summary
    cd02510
    Location:178 → 476
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:487 → 605
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  13. XM_021346652.3 → XP_021202327.1  putative polypeptide N-acetylgalactosaminyltransferase 9 isoform X1

    UniProtKB/TrEMBL
    A0A8R2C508
    Conserved Domains (2) summary
    cd02510
    Location:178 → 476
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:487 → 605
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  14. XM_062669679.1 → XP_062525663.1  putative polypeptide N-acetylgalactosaminyltransferase 9 isoform X3

    UniProtKB/TrEMBL
    A0A8R2AL18

  15. XM_062669683.1 → XP_062525667.1  putative polypeptide N-acetylgalactosaminyltransferase 9 isoform X4

  16. XM_038012593.2 → XP_037868521.1  putative polypeptide N-acetylgalactosaminyltransferase 9 isoform X1

    UniProtKB/TrEMBL
    A0A8R2C508
    Conserved Domains (2) summary
    cd02510
    Location:178 → 476
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:487 → 605
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials