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LOC101735893 polypeptide N-acetylgalactosaminyltransferase 3 [ Bombyx mori (domestic silkworm) ]

Gene ID: 101735893, updated on 9-Feb-2024

Summary

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Gene symbol
LOC101735893
Gene description
polypeptide N-acetylgalactosaminyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombyx mori
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx
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Genomic context

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See LOC101735893 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_01 current ASM3026992v2 (GCF_030269925.1) 3 NC_085109.1 (8516886..8528555)
103 previous assembly Bmori_2016v1.0 (GCF_014905235.1) 3 NC_051360.1 (8480308..8487816)

Chromosome 3 - NC_085109.1Genomic Context describing neighboring genes Neighboring gene ATP-dependent DNA/RNA helicase DHX36 Neighboring gene uncharacterized LOC134201414 Neighboring gene uncharacterized LOC101746778 Neighboring gene uncharacterized LOC134200770 Neighboring gene myb/SANT-like DNA-binding domain-containing protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptomic analysis of developmental features of Bombyx mori wing disc during metamorphosis. Ou J, et al. BMC Genomics, 2014 Sep 27. PMID 25261999, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polypeptide N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030269925.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3026992v2 Primary Assembly

Genomic

  1. NC_085109.1 Reference ASM3026992v2 Primary Assembly

    Range
    8516886..8528555
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062676137.1 → XP_062532121.1  polypeptide N-acetylgalactosaminyltransferase 3 isoform X2

  2. XM_012695232.4 → XP_012550686.1  polypeptide N-acetylgalactosaminyltransferase 3 isoform X1

    UniProtKB/TrEMBL
    A0A8R2C8Q8
    Conserved Domains (2) summary
    cd02510
    Location:162 → 461
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam13641
    Location:162 → 389
    Glyco_tranf_2_3; Glycosyltransferase like family 2
Nucleotide Protein
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