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LOC101735613 N-acetylgalactosaminyltransferase 7 [ Bombyx mori (domestic silkworm) ]

Gene ID: 101735613, updated on 10-May-2024

Summary

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Gene symbol
LOC101735613
Gene description
N-acetylgalactosaminyltransferase 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombyx mori
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx
Also known as
GalNAc-T
Orthologs
fruit fly all
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Genomic context

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See LOC101735613 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_01 current ASM3026992v2 (GCF_030269925.1) 12 NC_085118.1 (3124693..3136178)
103 previous assembly Bmori_2016v1.0 (GCF_014905235.1) 12 NC_051369.1 (3118551..3129987)

Chromosome 12 - NC_085118.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119629295 Neighboring gene uncharacterized LOC101735753 Neighboring gene protein CEBPZOS Neighboring gene Tubulin-binding cofactor C Neighboring gene spondin-2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Large scale full-length cDNA sequencing reveals a unique genomic landscape in a lepidopteran model insect, Bombyx mori. Suetsugu Y, et al. G3 (Bethesda), 2013 Sep 4. PMID 23821615, Free PMC Article
  2. Transcriptomic analysis of developmental features of Bombyx mori wing disc during metamorphosis. Ou J, et al. BMC Genomics, 2014 Sep 27. PMID 25261999, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polypeptide N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylgalactosaminyltransferase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030269925.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3026992v2 Primary Assembly

Genomic

  1. NC_085118.1 Reference ASM3026992v2 Primary Assembly

    Range
    3124693..3136178
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004929383.5 → XP_004929440.1  N-acetylgalactosaminyltransferase 7

    UniProtKB/TrEMBL
    A0A8R2ASH0, L7WM53
    Conserved Domains (4) summary
    cd02510
    Location:141 → 448
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:465 → 579
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:464 → 578
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    pfam13641
    Location:141 → 369
    Glyco_tranf_2_3; Glycosyltransferase like family 2
Nucleotide Protein
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