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LOC101733761 zinc finger protein 182 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 101733761, updated on 4-Nov-2024

Summary

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Official Symbol
LOC101733761provided by Xenbase
Official Full Name
zinc finger protein 182provided by Xenbase
Primary source
Xenbase:XB-GENE-29087211
See related
Ensembl:ENSXETG00000039484 AllianceGenome:Xenbase:XB-GENE-29087211
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Summary
Predicted to enable metal ion binding activity. Predicted to act upstream of or within regulation of DNA-templated transcription. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See LOC101733761 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (163172162..163190497)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) Unplaced Scaffold NW_016685029.1 (719..9989)

Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene zinc finger protein 436-like Neighboring gene loricrin-like Neighboring gene zinc finger protein 71 Neighboring gene zinc finger protein 84 like Neighboring gene zinc finger protein 436-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
zinc finger protein 182

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    163172162..163190497
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018090618.2 → XP_017946107.2  zinc finger protein 182

    UniProtKB/TrEMBL
    A0A6I8SH98
    Related
    ENSXETP00000097633.2, ENSXETT00000095888.2
    Conserved Domains (5) summary
    COG5189
    Location:302 → 385
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:280 → 300
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:280 → 300
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:376 → 401
    zf-H2C2_2; Zinc-finger double domain
    cl02581
    Location:9 → 68
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
Nucleotide Protein Strain
Heading Accession and Version

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