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LOC101732603 gastrula zinc finger protein XlCGF26.1-like [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 101732603, updated on 17-Aug-2024

Summary

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Official Symbol
LOC101732603provided by Xenbase
Official Full Name
gastrula zinc finger protein XlCGF26.1-likeprovided by Xenbase
Primary source
Xenbase:XB-GENE-29086239
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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Genomic context

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See LOC101732603 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
4
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (4499967..4517747)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 9 NC_030685.1 (29750655..29767217)

Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene gastrula zinc finger protein XlCGF26.1 Neighboring gene gastrula zinc finger protein XlCGF26.1-like Neighboring gene zinc finger protein 729-like Neighboring gene gastrula zinc finger protein XlCGF26.1-like Neighboring gene oocyte zinc finger protein XlCOF26-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
gastrula zinc finger protein XlCGF26.1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    4499967..4517747
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012953670.3 → XP_012809124.1  gastrula zinc finger protein XlCGF26.1-like isoform X2

    UniProtKB/TrEMBL
    A0A8J0SBX3
    Conserved Domains (3) summary
    COG5048
    Location:64 → 506
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:432 → 452
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:472 → 496
    zf-H2C2_2; Zinc-finger double domain

  2. XM_031904255.1 → XP_031760115.1  gastrula zinc finger protein XlCGF26.1-like isoform X1

    UniProtKB/TrEMBL
    A0A8J1JSX2
    Conserved Domains (2) summary
    COG5048
    Location:103 → 545
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:471 → 491
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein Strain
Heading Accession and Version

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