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LOC101732321 gastrula zinc finger protein XlCGF57.1-like [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 101732321, updated on 5-Jul-2023

Summary

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Official Symbol
LOC101732321provided by Xenbase
Official Full Name
gastrula zinc finger protein XlCGF57.1-likeprovided by Xenbase
Primary source
Xenbase:XB-GENE-29086031
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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Genomic context

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See LOC101732321 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
3
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (3682988..3685798)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) Unplaced Scaffold NW_016683397.1 (504404..506829, complement)

Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116411530 Neighboring gene provisional ortholog of tripartite motif containing 25 Neighboring gene uncharacterized LOC116411531 Neighboring gene E3 ubiquitin/ISG15 ligase TRIM25 Neighboring gene gastrula zinc finger protein XlCGF26.1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
gastrula zinc finger protein XlCGF57.1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    3682988..3685798
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031904290.1 → XP_031760150.1  gastrula zinc finger protein XlCGF57.1-like

    UniProtKB/TrEMBL
    A0A8J1JT00
    Conserved Domains (2) summary
    COG5048
    Location:160 → 390
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:121 → 141
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein Strain
Heading Accession and Version

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