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Champ1 chromosome alignment maintaining phosphoprotein 1 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101722945, updated on 8-Mar-2024

Summary

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Gene symbol
Champ1
Gene description
chromosome alignment maintaining phosphoprotein 1
Locus tag
GW7_08570
See related
Ensembl:ENSHGLG00000019874
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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See Champ1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624793.1 (109854..121461, complement)

NW_004624793.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-fold modifier 1 pseudogene Neighboring gene nucleophosmin pseudogene Neighboring gene uncharacterized LOC110344667 Neighboring gene UPF3A regulator of nonsense mediated mRNA decay Neighboring gene cell division cycle 16

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624793 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in attachment of mitotic spindle microtubules to kinetochore IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to kinetochore IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sister chromatid biorientation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in spindle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chromosome alignment-maintaining phosphoprotein 1
Names
Zinc finger protein 828

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624793.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    109854..121461 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004858473.2 → XP_004858530.1  chromosome alignment-maintaining phosphoprotein 1

    See identical proteins and their annotated locations for XP_004858530.1

    UniProtKB/TrEMBL
    G5AVU3
    Related
    ENSHGLP00000027809.1, ENSHGLT00000028084.1
    Conserved Domains (2) summary
    sd00017
    Location:736 → 756
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl26464
    Location:109 → 544
    Atrophin-1; Atrophin-1 family

  2. XM_013077334.2 → XP_012932788.1  chromosome alignment-maintaining phosphoprotein 1

    See identical proteins and their annotated locations for XP_012932788.1

    UniProtKB/TrEMBL
    G5AVU3
    Conserved Domains (2) summary
    sd00017
    Location:736 → 756
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl26464
    Location:109 → 544
    Atrophin-1; Atrophin-1 family

  3. XM_004858472.2 → XP_004858529.1  chromosome alignment-maintaining phosphoprotein 1

    See identical proteins and their annotated locations for XP_004858529.1

    UniProtKB/TrEMBL
    G5AVU3
    Conserved Domains (2) summary
    sd00017
    Location:736 → 756
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl26464
    Location:109 → 544
    Atrophin-1; Atrophin-1 family

  4. XM_021239340.1 → XP_021094999.1  chromosome alignment-maintaining phosphoprotein 1

    UniProtKB/TrEMBL
    G5AVU3
    Conserved Domains (2) summary
    sd00017
    Location:736 → 756
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl26464
    Location:109 → 544
    Atrophin-1; Atrophin-1 family

  5. XM_004858474.3 → XP_004858531.1  chromosome alignment-maintaining phosphoprotein 1

    See identical proteins and their annotated locations for XP_004858531.1

    UniProtKB/TrEMBL
    G5AVU3
    Conserved Domains (2) summary
    sd00017
    Location:736 → 756
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl26464
    Location:109 → 544
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
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