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Fut9 fucosyltransferase 9 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101722848, updated on 8-Mar-2024

Summary

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Gene symbol
Fut9
Gene description
fucosyltransferase 9
Locus tag
GW7_16465
See related
Ensembl:ENSHGLG00000003113
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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See Fut9 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624810.1 (9152805..9403382, complement)

NW_004624810.1Genomic Context describing neighboring genes Neighboring gene rho-related GTP-binding protein RhoN pseudogene Neighboring gene little elongation complex subunit 2 pseudogene Neighboring gene centrosomal protein of 57 kDa pseudogene Neighboring gene GPN-loop GTPase 3 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624810 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-(1,3)-fucosyltransferase 9
Names
Alpha-(1,3)-fucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624810.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    9152805..9403382 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004862506.3 → XP_004862563.1  alpha-(1,3)-fucosyltransferase 9

    See identical proteins and their annotated locations for XP_004862563.1

    UniProtKB/TrEMBL
    G5BQC9
    Conserved Domains (2) summary
    pfam00852
    Location:185 → 354
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:62 → 169
    Glyco_tran_10_N; Fucosyltransferase, N-terminal

  2. XM_004862508.2 → XP_004862565.1  alpha-(1,3)-fucosyltransferase 9

    See identical proteins and their annotated locations for XP_004862565.1

    UniProtKB/TrEMBL
    G5BQC9
    Related
    ENSHGLP00000004258.1, ENSHGLT00000004318.1
    Conserved Domains (2) summary
    pfam00852
    Location:185 → 354
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:62 → 169
    Glyco_tran_10_N; Fucosyltransferase, N-terminal
Nucleotide Protein
Heading Accession and Version

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