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Rmc1 regulator of MON1-CCZ1 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101709754, updated on 8-Mar-2024

Summary

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Gene symbol
Rmc1
Gene description
regulator of MON1-CCZ1
See related
Ensembl:ENSHGLG00000009136
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Also known as
Wdr98; CUNH18orf8
Orthologs
human mouse all
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Genomic context

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See Rmc1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624770.1 (8641752..8662248, complement)

NW_004624770.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110350825 Neighboring gene NPC intracellular cholesterol transporter 1 Neighboring gene C-terminal-binding protein 2 pseudogene Neighboring gene RIO kinase 3 Neighboring gene uncharacterized LOC110350826 Neighboring gene transmembrane protein 241

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624770 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Mon1-Ccz1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in late endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein C18orf8 homolog
Names
WD repeat domain 98
chromosome unknown C18orf8 homolog
uncharacterized protein C18orf8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624770.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    8641752..8662248 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013075261.2 → XP_012930715.1  uncharacterized protein C18orf8 homolog isoform X2

    UniProtKB/TrEMBL
    A0A0P6J0C7
    Conserved Domains (1) summary
    pfam07035
    Location:457 → 613
    Mic1; Colon cancer-associated protein Mic1-like

  2. XM_004853151.3 → XP_004853208.1  uncharacterized protein C18orf8 homolog isoform X1

    UniProtKB/TrEMBL
    A0A0P6J0C7
    Related
    ENSHGLP00000012775.1, ENSHGLT00000012912.1
    Conserved Domains (1) summary
    pfam07035
    Location:475 → 631
    Mic1; Colon cancer-associated protein Mic1-like

  3. XM_021265151.1 → XP_021120810.1  uncharacterized protein C18orf8 homolog isoform X4

  4. XM_021265150.1 → XP_021120809.1  uncharacterized protein C18orf8 homolog isoform X3

RNA

  1. XR_002397711.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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