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FASTKD5 FAST kinase domains 5 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101694192, updated on 8-Mar-2024

Summary

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Gene symbol
FASTKD5
Gene description
FAST kinase domains 5
See related
Ensembl:ENSMPUG00000019143
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See FASTKD5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421505.1 (8405196..8416572)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569317.1 (3203754..3215272)

NW_025421505.1Genomic Context describing neighboring genes Neighboring gene DDRGK domain containing 1 Neighboring gene leucine zipper tumor suppressor family member 3 Neighboring gene U-box domain containing 5 Neighboring gene uncharacterized LOC106003775 Neighboring gene histo-blood group ABO system transferase 2-like Neighboring gene arginine vasopressin Neighboring gene oxytocin/neurophysin I prepropeptide

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of mitochondrial mRNA stability IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribonucleoprotein granule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
FAST kinase domain-containing protein 5, mitochondrial
Names
FAST kinase domain-containing protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421505.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    8405196..8416572
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004772895.3 → XP_004772952.1  FAST kinase domain-containing protein 5, mitochondrial

    UniProtKB/TrEMBL
    M1ESQ5, M3Z608
    Related
    ENSMPUP00000019020.1
    Conserved Domains (3) summary
    smart00952
    Location:749 → 808
    RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
    pfam06743
    Location:482 → 550
    FAST_1; FAST kinase-like protein, subdomain 1
    pfam08368
    Location:565 → 652
    FAST_2; FAST kinase-like protein, subdomain 2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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