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LDHB lactate dehydrogenase B [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101693824, updated on 8-Mar-2024

Summary

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Gene symbol
LDHB
Gene description
lactate dehydrogenase B
See related
Ensembl:ENSMPUG00000000172
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See LDHB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025422368.1 (18614979..18634680, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569307.1 (217195..239828)

NW_025422368.1Genomic Context describing neighboring genes Neighboring gene spexin hormone Neighboring gene glycogen synthase 2 Neighboring gene uncharacterized LOC106003697 Neighboring gene potassium inwardly rectifying channel subfamily J member 8 Neighboring gene ATP binding cassette subfamily C member 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular characterization and expression pattern of the equine lactate dehydrogenase A and B genes. Echigoya Y, et al. Gene, 2009 Nov 1. PMID 19647052
  2. Transcriptome sequencing and development of an expression microarray platform for the domestic ferret. Bruder CE, et al. BMC Genomics, 2010 Apr 19. PMID 20403183, Free PMC Article
  3. De-novo transcriptome sequencing of a normalized cDNA pool from influenza infected ferrets. Camp JV, et al. PLoS One, 2012. PMID 22606336, Free PMC Article
  4. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article
  5. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-lactate dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carboxylic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
L-lactate dehydrogenase B chain
Names
H(B)-type lactate dehydrogenase
NP_001297117.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001310188.1 → NP_001297117.1  L-lactate dehydrogenase B chain

    See identical proteins and their annotated locations for NP_001297117.1

    Status: PROVISIONAL

    Source sequence(s)
    AB477026
    UniProtKB/TrEMBL
    C6L2F3
    Conserved Domains (1) summary
    cd05293
    Location:20 → 330
    LDH_1; A subgroup of L-lactate dehydrogenases

RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025422368.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    18614979..18634680 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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