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RXYLT1 ribitol xylosyltransferase 1 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101692107, updated on 8-Mar-2024

Summary

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Gene symbol
RXYLT1
Gene description
ribitol xylosyltransferase 1
See related
Ensembl:ENSMPUG00000016726
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Also known as
TMEM5
Orthologs
human mouse all
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Genomic context

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See RXYLT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025422127.1 (8700014..8716802, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569264.1 (3371198..3388019, complement)

NW_025422127.1Genomic Context describing neighboring genes Neighboring gene KICSTOR subunit 2 Neighboring gene guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5-like Neighboring gene SLIT-ROBO Rho GTPase activating protein 1 Neighboring gene protein mago nashi homolog Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De-novo transcriptome sequencing of a normalized cDNA pool from influenza infected ferrets. Camp JV, et al. PLoS One, 2012. PMID 22606336, Free PMC Article
  2. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ribitol beta-1,4-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribitol-5-phosphate xylosyltransferase 1
Names
transmembrane protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025422127.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    8700014..8716802 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045071678.1 → XP_044927613.1  ribitol-5-phosphate xylosyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8U0UU79

  2. XM_004766599.3 → XP_004766656.1  ribitol-5-phosphate xylosyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    M3YZ63
    Related
    ENSMPUP00000016623.1
Nucleotide Protein
Heading Accession and Version

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