U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PRKCSH PRKCSH beta subunit of glucosidase II [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101690230, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
PRKCSH
Gene description
PRKCSH beta subunit of glucosidase II
See related
Ensembl:ENSMPUG00000005047
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PRKCSH in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421280.1 (32931805..32942856, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569165.1 (2180492..2191531, complement)

NW_025421280.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 653 Neighboring gene ELAV like RNA binding protein 3 Neighboring gene outer dynein arm docking complex subunit 3 Neighboring gene ral guanine nucleotide dissociation stimulator like 3

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. De-novo transcriptome sequencing of a normalized cDNA pool from influenza infected ferrets. Camp JV, et al. PLoS One, 2012. PMID 22606336, Free PMC Article
  2. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in liver development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glucosidase II complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
glucosidase 2 subunit beta
Names
protein kinase C substrate 80K-H

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421280.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    32931805..32942856 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045083702.1 → XP_044939637.1  glucosidase 2 subunit beta isoform X4

    UniProtKB/TrEMBL
    A0A8U0SB03
    Conserved Domains (2) summary
    pfam12999
    Location:20 → 162
    PRKCSH-like; Glucosidase II beta subunit-like
    cl06793
    Location:383 → 511
    PRKCSH; Glucosidase II beta subunit-like protein

  2. XM_045083694.1 → XP_044939629.1  glucosidase 2 subunit beta isoform X2

    UniProtKB/TrEMBL
    M3Y107
    Conserved Domains (2) summary
    pfam12999
    Location:20 → 162
    PRKCSH-like; Glucosidase II beta subunit-like
    cl06793
    Location:390 → 518
    PRKCSH; Glucosidase II beta subunit-like protein

  3. XM_045083696.1 → XP_044939631.1  glucosidase 2 subunit beta isoform X3

    UniProtKB/TrEMBL
    A0A8U0SCS8
    Conserved Domains (2) summary
    pfam12999
    Location:20 → 162
    PRKCSH-like; Glucosidase II beta subunit-like
    cl06793
    Location:384 → 512
    PRKCSH; Glucosidase II beta subunit-like protein

  4. XM_013054134.2 → XP_012909588.1  glucosidase 2 subunit beta isoform X1

    See identical proteins and their annotated locations for XP_012909588.1

    UniProtKB/TrEMBL
    A0A8U0TCS0
    Conserved Domains (3) summary
    pfam12999
    Location:20 → 162
    PRKCSH-like; Glucosidase II beta subunit-like
    smart00192
    Location:69 → 104
    LDLa; Low-density lipoprotein receptor domain class A
    cl06793
    Location:391 → 519
    PRKCSH; Glucosidase II beta subunit-like protein

  5. XM_013054133.2 → XP_012909587.1  glucosidase 2 subunit beta isoform X1

    See identical proteins and their annotated locations for XP_012909587.1

    UniProtKB/TrEMBL
    A0A8U0TCS0
    Conserved Domains (3) summary
    pfam12999
    Location:20 → 162
    PRKCSH-like; Glucosidase II beta subunit-like
    smart00192
    Location:69 → 104
    LDLa; Low-density lipoprotein receptor domain class A
    cl06793
    Location:391 → 519
    PRKCSH; Glucosidase II beta subunit-like protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.