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SGMS1 sphingomyelin synthase 1 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101689257, updated on 8-Mar-2024

Summary

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Gene symbol
SGMS1
Gene description
sphingomyelin synthase 1
See related
Ensembl:ENSMPUG00000016976
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See SGMS1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421421.1 (6231812..6498191, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569244.1 (6605252..6871692, complement)

NW_025421421.1Genomic Context describing neighboring genes Neighboring gene N-acylsphingosine amidohydrolase 2 Neighboring gene U6 spliceosomal RNA Neighboring gene multiple inositol-polyphosphate phosphatase 1 Neighboring gene 3'-phosphoadenosine 5'-phosphosulfate synthase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De-novo transcriptome sequencing of a normalized cDNA pool from influenza infected ferrets. Camp JV, et al. PLoS One, 2012. PMID 22606336, Free PMC Article
  2. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ceramide cholinephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sphingomyelin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingomyelin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylcholine:ceramide cholinephosphotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421421.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    6231812..6498191 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045081446.1 → XP_044937381.1  phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8U0N163, M3YZW1
    Conserved Domains (2) summary
    cd09514
    Location:1 → 72
    SAM_SGMS1; SAM domain of sphingomyelin synthase
    pfam14360
    Location:298 → 371
    PAP2_C; PAP2 superfamily C-terminal

  2. XM_004764115.3 → XP_004764172.1  phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_004764172.1

    UniProtKB/TrEMBL
    A0A8U0N163, M3YZW1
    Conserved Domains (2) summary
    cd09514
    Location:1 → 72
    SAM_SGMS1; SAM domain of sphingomyelin synthase
    pfam14360
    Location:298 → 371
    PAP2_C; PAP2 superfamily C-terminal

  3. XM_004764117.2 → XP_004764174.1  phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_004764174.1

    UniProtKB/TrEMBL
    A0A8U0N163, M3YZW1
    Conserved Domains (2) summary
    cd09514
    Location:1 → 72
    SAM_SGMS1; SAM domain of sphingomyelin synthase
    pfam14360
    Location:298 → 371
    PAP2_C; PAP2 superfamily C-terminal

  4. XM_004764113.2 → XP_004764170.1  phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_004764170.1

    UniProtKB/TrEMBL
    A0A8U0N163, M3YZW1
    Conserved Domains (2) summary
    cd09514
    Location:1 → 72
    SAM_SGMS1; SAM domain of sphingomyelin synthase
    pfam14360
    Location:298 → 371
    PAP2_C; PAP2 superfamily C-terminal

  5. XM_004764112.2 → XP_004764169.1  phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_004764169.1

    UniProtKB/TrEMBL
    A0A8U0N163, M3YZW1
    Conserved Domains (2) summary
    cd09514
    Location:1 → 72
    SAM_SGMS1; SAM domain of sphingomyelin synthase
    pfam14360
    Location:298 → 371
    PAP2_C; PAP2 superfamily C-terminal

  6. XM_004764116.2 → XP_004764173.1  phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_004764173.1

    UniProtKB/TrEMBL
    A0A8U0N163, M3YZW1
    Conserved Domains (2) summary
    cd09514
    Location:1 → 72
    SAM_SGMS1; SAM domain of sphingomyelin synthase
    pfam14360
    Location:298 → 371
    PAP2_C; PAP2 superfamily C-terminal

  7. XM_004764111.2 → XP_004764168.1  phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_004764168.1

    UniProtKB/TrEMBL
    A0A8U0N163, M3YZW1
    Conserved Domains (2) summary
    cd09514
    Location:1 → 72
    SAM_SGMS1; SAM domain of sphingomyelin synthase
    pfam14360
    Location:298 → 371
    PAP2_C; PAP2 superfamily C-terminal

  8. XM_004764114.2 → XP_004764171.1  phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_004764171.1

    UniProtKB/TrEMBL
    A0A8U0N163, M3YZW1
    Conserved Domains (2) summary
    cd09514
    Location:1 → 72
    SAM_SGMS1; SAM domain of sphingomyelin synthase
    pfam14360
    Location:298 → 371
    PAP2_C; PAP2 superfamily C-terminal

  9. XM_004764109.2 → XP_004764166.1  phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_004764166.1

    UniProtKB/TrEMBL
    A0A8U0N163, M3YZW1
    Conserved Domains (2) summary
    cd09514
    Location:1 → 72
    SAM_SGMS1; SAM domain of sphingomyelin synthase
    pfam14360
    Location:298 → 371
    PAP2_C; PAP2 superfamily C-terminal

  10. XM_004764110.2 → XP_004764167.1  phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_004764167.1

    UniProtKB/TrEMBL
    A0A8U0N163, M3YZW1
    Conserved Domains (2) summary
    cd09514
    Location:1 → 72
    SAM_SGMS1; SAM domain of sphingomyelin synthase
    pfam14360
    Location:298 → 371
    PAP2_C; PAP2 superfamily C-terminal

  11. XM_004764126.2 → XP_004764183.1  phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X2

    See identical proteins and their annotated locations for XP_004764183.1

    UniProtKB/TrEMBL
    G9KNI3, M3YZW1
    Related
    ENSMPUP00000016872.1
    Conserved Domains (3) summary
    cd09514
    Location:1 → 72
    SAM_SGMS1; SAM domain of sphingomyelin synthase
    smart00454
    Location:4 → 43
    SAM; Sterile alpha motif
    pfam14360
    Location:272 → 345
    PAP2_C; PAP2 superfamily C-terminal

  12. XM_045081448.1 → XP_044937383.1  phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8U0N163, M3YZW1
    Conserved Domains (2) summary
    cd09514
    Location:1 → 72
    SAM_SGMS1; SAM domain of sphingomyelin synthase
    pfam14360
    Location:298 → 371
    PAP2_C; PAP2 superfamily C-terminal

  13. XM_045081447.1 → XP_044937382.1  phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8U0N163, M3YZW1
    Conserved Domains (2) summary
    cd09514
    Location:1 → 72
    SAM_SGMS1; SAM domain of sphingomyelin synthase
    pfam14360
    Location:298 → 371
    PAP2_C; PAP2 superfamily C-terminal

  14. XM_004764121.3 → XP_004764178.1  phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_004764178.1

    UniProtKB/TrEMBL
    A0A8U0N163, M3YZW1
    Conserved Domains (2) summary
    cd09514
    Location:1 → 72
    SAM_SGMS1; SAM domain of sphingomyelin synthase
    pfam14360
    Location:298 → 371
    PAP2_C; PAP2 superfamily C-terminal

  15. XM_004764120.3 → XP_004764177.1  phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_004764177.1

    UniProtKB/TrEMBL
    A0A8U0N163, M3YZW1
    Conserved Domains (2) summary
    cd09514
    Location:1 → 72
    SAM_SGMS1; SAM domain of sphingomyelin synthase
    pfam14360
    Location:298 → 371
    PAP2_C; PAP2 superfamily C-terminal

  16. XM_004764123.3 → XP_004764180.1  phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_004764180.1

    UniProtKB/TrEMBL
    A0A8U0N163, M3YZW1
    Conserved Domains (2) summary
    cd09514
    Location:1 → 72
    SAM_SGMS1; SAM domain of sphingomyelin synthase
    pfam14360
    Location:298 → 371
    PAP2_C; PAP2 superfamily C-terminal

  17. XM_004764124.3 → XP_004764181.1  phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_004764181.1

    UniProtKB/TrEMBL
    A0A8U0N163, M3YZW1
    Conserved Domains (2) summary
    cd09514
    Location:1 → 72
    SAM_SGMS1; SAM domain of sphingomyelin synthase
    pfam14360
    Location:298 → 371
    PAP2_C; PAP2 superfamily C-terminal
Nucleotide Protein
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