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LYPD5 LY6/PLAUR domain containing 5 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101688331, updated on 8-Mar-2024

Summary

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Gene symbol
LYPD5
Gene description
LY6/PLAUR domain containing 5
See related
Ensembl:ENSMPUG00000006560
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See LYPD5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421310.1 (14887329..14891718)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569271.1 (5531776..5537098)

NW_025421310.1Genomic Context describing neighboring genes Neighboring gene centrosomal protein of 19 kDa-like Neighboring gene vomeronasal type-1 receptor 4-like Neighboring gene potassium calcium-activated channel subfamily N member 4 Neighboring gene SMG9 nonsense mediated mRNA decay factor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ly6/PLAUR domain-containing protein 5
Names
ly6/PLAUR domain-containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421310.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    14887329..14891718
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004767681.3 → XP_004767738.1  ly6/PLAUR domain-containing protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A8U0T290, M3Y5A3
    Related
    ENSMPUP00000006504.1
    Conserved Domains (1) summary
    pfam00021
    Location:133 → 212
    UPAR_LY6; u-PAR/Ly-6 domain

  2. XM_004767682.3 → XP_004767739.1  ly6/PLAUR domain-containing protein 5 isoform X2

    UniProtKB/TrEMBL
    A0A8U0N5X8, M3Y5A3
    Conserved Domains (1) summary
    pfam00021
    Location:133 → 205
    UPAR_LY6; u-PAR/Ly-6 domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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