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UBXN2A UBX domain protein 2A [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101688039, updated on 8-Mar-2024

Summary

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Gene symbol
UBXN2A
Gene description
UBX domain protein 2A
See related
Ensembl:ENSMPUG00000013862
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See UBXN2A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421343.1 (32326995..32380187, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569158.1 (18015178..18068276)

NW_025421343.1Genomic Context describing neighboring genes Neighboring gene WD repeat and coiled coil containing Neighboring gene MFSD2 lysolipid transporter B, sphingolipid Neighboring gene ATPase family AAA domain containing 2B Neighboring gene kelch like family member 29

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De-novo transcriptome sequencing of a normalized cDNA pool from influenza infected ferrets. Camp JV, et al. PLoS One, 2012. PMID 22606336, Free PMC Article
  2. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear membrane reassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UBX domain-containing protein 2A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421343.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    32326995..32380187 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004745892.3 → XP_004745949.1  UBX domain-containing protein 2A

    See identical proteins and their annotated locations for XP_004745949.1

    UniProtKB/TrEMBL
    A0A8U0S2H8, M3YR00
    Conserved Domains (2) summary
    cd17160
    Location:166 → 249
    UBX_UBXN2A; Ubiquitin regulatory domain X (UBX) found in UBX domain protein 2A (UBXN2A) and similar proteins
    pfam08059
    Location:65 → 138
    SEP; SEP domain

  2. XM_045079320.1 → XP_044935255.1  UBX domain-containing protein 2A

    UniProtKB/TrEMBL
    A0A8U0S2H8, M3YR00
    Conserved Domains (2) summary
    cd17160
    Location:166 → 249
    UBX_UBXN2A; Ubiquitin regulatory domain X (UBX) found in UBX domain protein 2A (UBXN2A) and similar proteins
    pfam08059
    Location:65 → 138
    SEP; SEP domain

  3. XM_004745894.3 → XP_004745951.1  UBX domain-containing protein 2A

    See identical proteins and their annotated locations for XP_004745951.1

    UniProtKB/TrEMBL
    A0A8U0S2H8, M3YR00
    Related
    ENSMPUP00000013759.1
    Conserved Domains (2) summary
    cd17160
    Location:166 → 249
    UBX_UBXN2A; Ubiquitin regulatory domain X (UBX) found in UBX domain protein 2A (UBXN2A) and similar proteins
    pfam08059
    Location:65 → 138
    SEP; SEP domain

  4. XM_045079321.1 → XP_044935256.1  UBX domain-containing protein 2A

    UniProtKB/TrEMBL
    A0A8U0S2H8, M3YR00
    Conserved Domains (2) summary
    cd17160
    Location:166 → 249
    UBX_UBXN2A; Ubiquitin regulatory domain X (UBX) found in UBX domain protein 2A (UBXN2A) and similar proteins
    pfam08059
    Location:65 → 138
    SEP; SEP domain
Nucleotide Protein
Heading Accession and Version

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