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CD44 CD44 molecule (IN blood group) [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101687039, updated on 8-Mar-2024

Summary

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Gene symbol
CD44
Gene description
CD44 molecule (IN blood group)
See related
Ensembl:ENSMPUG00000011692
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See CD44 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025422011.1 (10429745..10516737, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569193.1 (9018098..9104936)

NW_025422011.1Genomic Context describing neighboring genes Neighboring gene peptidase domain containing associated with muscle regeneration 1 Neighboring gene uncharacterized LOC123387763 Neighboring gene solute carrier family 1 member 2 Neighboring gene uncharacterized LOC123387765 Neighboring gene uncharacterized LOC106006147 Neighboring gene pyruvate dehydrogenase complex component X Neighboring gene APAF1 interacting protein Neighboring gene eukaryotic translation initiation factor 4E type 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing and development of an expression microarray platform for the domestic ferret. Bruder CE, et al. BMC Genomics, 2010 Apr 19. PMID 20403183, Free PMC Article
  2. De-novo transcriptome sequencing of a normalized cDNA pool from influenza infected ferrets. Camp JV, et al. PLoS One, 2012. PMID 22606336, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hyaluronic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of ERK1 and ERK2 cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basolateral plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of macrophage migration inhibitory factor receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CD44 antigen
Names
CD44 molecule (Indian blood group)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025422011.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    10429745..10516737 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045066026.1 → XP_044921961.1  CD44 antigen isoform X3

    UniProtKB/TrEMBL
    A0A8U0REU0, M3YJU1
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  2. XM_045066027.1 → XP_044921962.1  CD44 antigen isoform X4

    UniProtKB/TrEMBL
    A0A8U0REU2, M3YJU1
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  3. XM_045066025.1 → XP_044921960.1  CD44 antigen isoform X2

    UniProtKB/TrEMBL
    A0A8U0UNB3, M3YJU1
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  4. XM_045066024.1 → XP_044921959.1  CD44 antigen isoform X1

    UniProtKB/TrEMBL
    A0A8U0RFZ8, M3YJU1
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  5. XM_045066033.1 → XP_044921968.1  CD44 antigen isoform X10

    UniProtKB/TrEMBL
    A0A8U0RBG8, M3YJU1
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  6. XM_045066028.1 → XP_044921963.1  CD44 antigen isoform X6

    UniProtKB/TrEMBL
    A0A8U0RDH7, M3YJU1
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  7. XM_045066035.1 → XP_044921970.1  CD44 antigen isoform X12

    UniProtKB/TrEMBL
    A0A8U0RCU1, M3YJU1
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  8. XM_045066032.1 → XP_044921967.1  CD44 antigen isoform X9

    UniProtKB/TrEMBL
    A0A8U0RCH9, M3YJU1
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  9. XM_013057987.2 → XP_012913441.1  CD44 antigen isoform X5

    UniProtKB/TrEMBL
    A0A8U0NUN1, M3YJU1
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  10. XM_045066034.1 → XP_044921969.1  CD44 antigen isoform X11

    UniProtKB/TrEMBL
    A0A8U0UP62
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  11. XM_013057994.2 → XP_012913448.1  CD44 antigen isoform X13

    UniProtKB/TrEMBL
    A0A8U0TER2
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  12. XM_045066036.1 → XP_044921971.1  CD44 antigen isoform X16

    UniProtKB/TrEMBL
    A0A8U0UPS0
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  13. XM_045066038.1 → XP_044921973.1  CD44 antigen isoform X18

    UniProtKB/TrEMBL
    A0A8U0UNT0
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  14. XM_013057998.2 → XP_012913452.1  CD44 antigen isoform X17

    UniProtKB/TrEMBL
    A0A8U0NV91
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  15. XM_013057997.2 → XP_012913451.1  CD44 antigen isoform X15

    UniProtKB/TrEMBL
    A0A8U0NVH4
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  16. XM_013057995.2 → XP_012913449.1  CD44 antigen isoform X14

    UniProtKB/TrEMBL
    A0A8U0NWA7
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  17. XM_045066039.1 → XP_044921974.1  CD44 antigen isoform X19

    UniProtKB/TrEMBL
    A0A8U0RG09
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  18. XM_013057999.2 → XP_012913453.1  CD44 antigen isoform X20

    UniProtKB/TrEMBL
    A0A8U0NV62
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  19. XM_045066031.1 → XP_044921966.1  CD44 antigen isoform X8

    UniProtKB/TrEMBL
    A0A8U0RB25, M3YJU1
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  20. XM_045066030.1 → XP_044921965.1  CD44 antigen isoform X7

    UniProtKB/TrEMBL
    A0A8U0RC94, M3YJU1
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...
Nucleotide Protein
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