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XKR8 XK related 8 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101686405, updated on 8-Mar-2024

Summary

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Gene symbol
XKR8
Gene description
XK related 8
See related
Ensembl:ENSMPUG00000015551
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See XKR8 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025422005.1 (20481182..20487449)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569147.1 (18936121..18942969, complement)

NW_025422005.1Genomic Context describing neighboring genes Neighboring gene replication protein A2 Neighboring gene sphingomyelin phosphodiesterase acid like 3B Neighboring gene uncharacterized LOC106003948 Neighboring gene EYA transcriptional coactivator and phosphatase 3 Neighboring gene platelet activating factor receptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing and development of an expression microarray platform for the domestic ferret. Bruder CE, et al. BMC Genomics, 2010 Apr 19. PMID 20403183, Free PMC Article
  2. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in apoptotic process involved in development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in engulfment of apoptotic cell IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylserine exposure on apoptotic cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
XK-related protein 8
Names
sphingomyelin phosphodiesterase, acid-like 3B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025422005.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    20481182..20487449
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004741037.3 → XP_004741094.1  XK-related protein 8

    UniProtKB/TrEMBL
    M3YVT0
    Related
    ENSMPUP00000015440.1
    Conserved Domains (1) summary
    pfam09815
    Location:15 → 344
    XK-related; XK-related protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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