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HPGDS hematopoietic prostaglandin D synthase [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101684441, updated on 8-Mar-2024

Summary

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Gene symbol
HPGDS
Gene description
hematopoietic prostaglandin D synthase
See related
Ensembl:ENSMPUG00000002107
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See HPGDS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025422023.1 (2750522..2781193, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569194.1 (4154632..4185281)

NW_025422023.1Genomic Context describing neighboring genes Neighboring gene atonal bHLH transcription factor 1 Neighboring gene SNF2 related chromatin remodeling ATPase with DExD box 1 Neighboring gene PDZ and LIM domain 5 Neighboring gene bone morphogenetic protein receptor type 1B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glutathione transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glutathione metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hematopoietic prostaglandin D synthase
Names
Glutathione-requiring prostaglandin D synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025422023.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    2750522..2781193 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004756054.3 → XP_004756111.1  hematopoietic prostaglandin D synthase

    See identical proteins and their annotated locations for XP_004756111.1

    UniProtKB/TrEMBL
    M3XSN6
    Conserved Domains (2) summary
    cd10295
    Location:82 → 181
    GST_C_Sigma; C-terminal, alpha helical domain of Class Sigma Glutathione S-transferases
    cd03039
    Location:4 → 73
    GST_N_Sigma_like; GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of ...

  2. XM_004756053.3 → XP_004756110.1  hematopoietic prostaglandin D synthase

    See identical proteins and their annotated locations for XP_004756110.1

    UniProtKB/TrEMBL
    M3XSN6
    Related
    ENSMPUP00000002086.1
    Conserved Domains (2) summary
    cd10295
    Location:82 → 181
    GST_C_Sigma; C-terminal, alpha helical domain of Class Sigma Glutathione S-transferases
    cd03039
    Location:4 → 73
    GST_N_Sigma_like; GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of ...
Nucleotide Protein
Heading Accession and Version

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