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CLIP2 CAP-Gly domain containing linker protein 2 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101683807, updated on 8-Mar-2024

Summary

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Gene symbol
CLIP2
Gene description
CAP-Gly domain containing linker protein 2
See related
Ensembl:ENSMPUG00000016121
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See CLIP2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421293.1 (5385893..5452050, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569223.1 (3091653..3158099)

NW_025421293.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123390684 Neighboring gene GTF2I repeat domain containing 1 Neighboring gene uncharacterized LOC123390685 Neighboring gene uncharacterized LOC101686882 Neighboring gene replication factor C subunit 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing and development of an expression microarray platform for the domestic ferret. Bruder CE, et al. BMC Genomics, 2010 Apr 19. PMID 20403183, Free PMC Article
  2. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables microtubule plus-end binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic microtubule organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule plus-end IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CAP-Gly domain-containing linker protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421293.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    5385893..5452050 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045074946.1 → XP_044930881.1  CAP-Gly domain-containing linker protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8U0RUH3, M3YXF4
    Conserved Domains (2) summary
    smart01052
    Location:224 → 287
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    COG1196
    Location:358 → 1018
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  2. XM_045074947.1 → XP_044930882.1  CAP-Gly domain-containing linker protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A8U0RV46
    Conserved Domains (2) summary
    smart01052
    Location:224 → 287
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    COG1196
    Location:352 → 983
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  3. XM_045074945.1 → XP_044930880.1  CAP-Gly domain-containing linker protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8U0RUH3, M3YXF4
    Conserved Domains (2) summary
    smart01052
    Location:224 → 287
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    COG1196
    Location:358 → 1018
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  4. XM_045074948.1 → XP_044930883.1  CAP-Gly domain-containing linker protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A8U0UXC2
    Conserved Domains (2) summary
    smart01052
    Location:224 → 287
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    COG5244
    Location:224 → 849
    NIP100; Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning]
Nucleotide Protein
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